Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq501 86.0 1e-11
seq143 86.0 1e-11
>seq501
Length=894163
Score = 86.0 bits (94), Expect = 1e-11
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGT-AGAACATAAC 146090
|||| |||||||||||||| |||||| || || || ||| |||| || | ||| | |
Sbjct 181601 TGCAGATATTCATAAAAACCCTAACAGAGAAGACCATCACTCTTGAGGTCAAAACCTCA- 181659
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| |||||| |||| |||| | || || || ||| |||| ||||| || |||||
Sbjct 181660 GACACTATTGGAAATATAAAGGACAAGATCCAGGATAACGAAGAAATTCCTCCTGATCAG 181719
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
| ||| | |||||||| || || ||| | || ||| | || | | || || ||
Sbjct 181720 TAGAGAATAATTTTTGCTGGCAAGCAACTGGAAGATGGACGCACCCTGTCTGACTACAAC 181779
Query 146211 ATACAAAAAGAATCGACTATC 146231
|| ||||| ||||| ||| ||
Sbjct 181780 ATTCAAAAGGAATCCACTTTC 181800
>seq143
Length=9160510
Score = 86.0 bits (94), Expect = 1e-11
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| || || || || || ||||| |||| ||||| | | |
Sbjct 9114998 TGCAGATCTTCGTGAAAACCTTGACTGGTAAGACCATTACCCTTGAAGTAGAGCCCAGTG 9115057
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| ||| || || ||| ||||||||||| || || || || |
Sbjct 9115058 ACACCATTGAGAATGTCAAAGCAAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAGC 9115117
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | || ||||| || ||||| | || || || | || | | || || || |
Sbjct 9115118 AGAGATTGATCTTTGCTGGGAAACAGCTGGAAGACAAGCGCACACTGTCTGACTACAACA 9115177
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| || |||||||| || | || || || | || || || ||||||
Sbjct 9115178 TCCAGAAAGAATCTACCCTGCACTTGGTCCTGCGTTTGAGGGGAGGT 9115224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785964944860000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |