Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq14 237 2e-57
seq61 141 1e-28
>seq14
Length=34905451
Score = 237 bits (262), Expect = 2e-57
Identities = 580/870 (67%), Gaps = 17/870 (2%)
Strand=Plus/Minus
Query 162121 TCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGAT 162180
|| |||||||| || |||| ||| || | | | || ||||| || | |||||| |
Sbjct 23451790 TCAAACTTGTTGGCAAACAAGTGGTGTTTG--CGT-AACATCCAGTTCAAATCCCCTGCC 23451734
Query 162181 CCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCG 162240
|| || ||||||||||| ||||| || | ||| ||||| || || || |||| || | |
Sbjct 23451733 CCAAAAACGCACACGGAGCGCACATGGATGCCACTGCAGGGTGGGTAGGGGGCGCCCTTG 23451674
Query 162241 TCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAG 162300
||||| || || |||| ||||| || || ||||| | | || |||||||| ||
Sbjct 23451673 GAAACATCGCCTTCAAAGTAGTGCCATTTGACAAACCTTGCAAACGCGTGCATGTCAGAT 23451614
Query 162301 GTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAGTA 162360
|||||||| || | ||| || | || ||||| || | || | || || | |||
Sbjct 23451613 GTGTCGTATTTATCGTTTGAAGGGAGTGCGCCAGGGACGTCTGGAATCCTTTGAATAGTG 23451554
Query 162361 GCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACC 162420
|||||||| | ||| || || ||||| || || || | ||||||||| |||| ||||
Sbjct 23451553 GCCCACAGATATTCATCGGGGCTATAGGTGTCTTTTGCCCACTCCATAAACT-TCTGAAT 23451495
Query 162421 GTTTT-ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACC 162479
|||| || | ||| | ||| |||||| ||| | || | ||| || || || ||
Sbjct 23451494 TTTTTCATTTTCTAGTACATAACCCACGTAGTTCCTATTGACCACAAAATAGGCACTGCC 23451435
Query 162480 AGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCAT 162539
|||||| | |||| | | |||||| | |||||| | ||| ||||| || |
Sbjct 23451434 AGAAAAAATGGGTGTTTCGAGAGGAGGACGTACTTTGTTTGCACCGGTGTT-TGTAATCT 23451376
Query 162540 TCCCTCT----ACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGT 162595
|||| | || | | | | || | ||||||| || ||| || | | |
Sbjct 23451375 TCCCATTAATAACTTCAAAGCGCCTTT---TCCACCTTTCCTCTTTATAGGCTGGCATTT 23451319
Query 162596 GTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGAT 162655
||| || ||||| || || |||| | | || |||| | || ||||| || |
Sbjct 23451318 TTTCAGTTTCTAGGCTATTTTCACCCATTACTGATTTGAGCTTCCTGACAATCTCCAGGT 23451259
Query 162656 TGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGA 162715
|||| |||| || || || | || || ||||| || | || ||||| | || |
Sbjct 23451258 TGGTTTTAATAGGGAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTCTGTACTCA 23451199
Query 162716 GTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACA 162775
| ||| ||||||| | ||||| || ||||||||||| || ||||| || || || |
Sbjct 23451198 TTTTGTAGAGATCCTTCATGCAGTTAAGGTCGGCCTGGACTCGGCTCCAGGAAGCATAGA 23451139
Query 162776 CGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA 162835
| || |||||| | |||| ||||||||||| ||| || || | || |||||||
Sbjct 23451138 CCACAGTCTCCAGCTGGCTGGCCACAAAGACATTACTGAAGCAGGATGCAATACCCATCA 23451079
Query 162836 CGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTG 162893
| || || | || ||| || | || | || || || | ||| || | ||||||
Sbjct 23451078 CTGCACGTAAAAAGGAATC--ATCTGACTTTTTGTCCACATGAATGCAATAGAAATTCTG 23451021
Query 162894 AGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGAT 162953
||| ||||||||||||||| | || || | | || ||||| ||||| || || |
Sbjct 23451020 AGGCATGTAGATGGCCCTCAGAAGCCTGTCAAGTAGTTCAATCTTGTGGTGAACTACTAC 23450961
Query 162954 AGAATACGCTATGGGGAACTCAGCCTCCTC 162983
|||||| || || || ||||| ||||| ||
Sbjct 23450960 AGAATATGCAATTGGAAACTCCGCCTCTTC 23450931
>seq61
Length=18009331
Score = 141 bits (156), Expect = 1e-28
Identities = 177/242 (73%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 171500 GTAACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCC 171559
|| |||||||| ||| |||| |||||||||||| |||| |||||||| |||||||||
Sbjct 14900896 GTGACAGTTTGCTTGAAGTCTTTTACAGTCCCCAGATGTAGCACTTTGCAGATCACCTCC 14900955
Query 171560 TCGTTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTC 171619
| | ||||| ||||||| || ||| | | || || ||||| || ||||||||||||
Sbjct 14900956 T---TCCCCACCTGACTTTCGGGGTCTCTGATGTGCAGGATGCTCGTGACAGATGTAGTC 14901012
Query 171620 CCGTTACGATGTAGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679
|| || | ||| | | ||| ||| || || || || || || || | || |||||
Sbjct 14901013 CCATTGGGGTGTGACAGGCTTTCAGTGCTGTTCTCAATCCCTGACCCATCCACCTTCCAG 14901072
Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739
|||| || ||||| | |||||||||||||| || || ||||| ||||| |||
Sbjct 14901073 TTGATAATGGGGGCTGGACGGGCAGTAGCAGAGCAGGTGATATTTAAGTGGTCTTCAAAG 14901132
Query 171740 AA 171741
||
Sbjct 14901133 AA 14901134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578283776800000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |