Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq172 102 7e-17 seq8 89.7 5e-13 >seq172 Length=7263250 Score = 102 bits (112), Expect = 7e-17 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||| | | || |||||||| ||||||| || ||||||| |||| |||||| | Sbjct 739994 CAAGATGAAGATTTTCGTAAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAACC 740053 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || | | ||||| || || ||||| || || || || || || Sbjct 740054 CTCGGATACAATAAAAAATGTAAAGGCCAAGATCCATGATAAGGAAGGAATTCCTCCTGA 740113 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGAT 25348 |||||| ||||| |||| | ||||| ||||| ||||||| | | |||| | | Sbjct 740114 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGCACCCTGTCTG--AC 740171 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 |||||||||||||| || ||||| ||||| | ||||| ||| Sbjct 740172 TACAATATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 740213 >seq8 Length=38990876 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||||||||| |||| || || |||||| |||| |||||| | Sbjct 3001442 CAAGATGCAGATTTTTGTAAAAACCCTAACGGGGAAGATGATCACTCTCGAGGTCGAACC 3001501 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| ||| | | ||||| || || ||||| || || || | || || Sbjct 3001502 CTCGGATACGATCAAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTTCTCCTGA 3001561 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGAT 25348 |||||| ||| | |||| | ||||| ||||| |||| || | | |||| || Sbjct 3001562 TCAGCAGAGATTGATTTTTGCTGGCAAGCAACTGGAAGTTGGACGCACCCTGTC--TGAC 3001619 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| |||||||| || ||||| ||||| | ||||| ||| Sbjct 3001620 TACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 3001661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444980344560000