Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq99 95.1 1e-14
seq451 91.5 1e-13
seq170 91.5 1e-13
seq26 91.5 1e-13
seq53 87.8 2e-12
seq78 86.0 5e-12
seq126 84.2 2e-11
seq172 82.4 6e-11
seq66 82.4 6e-11
seq45 82.4 6e-11
seq31 82.4 6e-11
>seq99
Length=12215380
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || |||| |||| |||| || | || || ||||| || || ||||||||
Sbjct 7048509 TGCCACCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 7048450
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| ||| || || || |||| |||||| || |||| ||| ||||||| || || |
Sbjct 7048449 AGAGAGTGCAGTCATCCTCCAGCTATTTACCAGCAAAAATCAGATGCTGTTGGTCAGGGG 7048390
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| || || ||| ||| ||| | | || | ||||| || || |
Sbjct 7048389 GGATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGAGCTCCA 7048330
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || ||||| || | ||||||||||| || || |||||||| ||||| ||||
Sbjct 7048329 CCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTTACAAAGATCTGCATCTCTGC 7048275
>seq451
Length=1225386
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| | || |||||||| | |||| | || || |||||||||||
Sbjct 1000177 GTGGACTCTTTCTAGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTACCC 1000236
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| |||| |||||||| || || || || | |||||| || || ||| ||| |||
Sbjct 1000237 GCAAAAATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATTTTGGCTTTG 1000296
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | |||| ||||| | | || || || ||||| || | ||||| ||||| ||
Sbjct 1000297 ACATTCTCTATGGTGTCACTAGGCTCCACCTCAAGAGTAATGGTCTTGCCTGTCAGGGTC 1000356
Query 27231 TTCACAAAGATTTGCATAGCTGC 27253
||||||||||| ||||| ||||
Sbjct 1000357 TTCACAAAGATCTGCATCTCTGC 1000379
>seq170
Length=7561184
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || ||| |||| |||| || | || || ||||| || || ||||||||
Sbjct 6053195 TGCCACCACGCTGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 6053254
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| |||| | || || ||||||||||| || ||| || |||| || || ||||
Sbjct 6053255 AGAGAGTGCGGCCATCCTCCAGCTGTTTACCTGCAAAAACCAGCAGCTGCTGGTCAGGCG 6053314
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
||| |||||| || || ||| ||| ||| | | || | ||||| ||| || |
Sbjct 6053315 GCATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCCA 6053374
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || ||||| || | |||| |||||| || ||||||||||| || || ||||
Sbjct 6053375 CCTCAAGAGTGATGGTCTTGCTCGTCAGGGTCTTCACAAAGATCTGTATCTCTGC 6053429
>seq26
Length=26594169
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|||||| ||| |||| |||| || | || || ||||| || |||||||||||
Sbjct 3632820 CCTCCGTGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTGTGGATATTGTAGTCTGAG 3632879
Query 27081 ATGTTGCG-CTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| |||| || | || ||||||||||| || |||| |||||||| || || | ||
Sbjct 3632880 AGAGTGCGGCTATCCGTC-AGCTGTTTACCCGCAAAAATCAGACGCTGCTGGTCAGTGGG 3632938
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||| || || ||| ||| ||| | | || | ||||| ||| || ||
Sbjct 3632939 GATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 3632998
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|| ||||| || | ||| ||||||| || ||||||||||| ||| | ||||
Sbjct 3632999 CTCAAGAGTGATGGTCTTGTCCGTCAGGGTCTTCACAAAGATCTGCCTCTCTGC 3633052
>seq53
Length=19262973
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| | |||| | || || |||||||||||
Sbjct 11236679 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTACCT 11236738
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| |||| |||||||| || || || || | |||||| || || ||| ||| |||
Sbjct 11236739 GCAAAAATCAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGGATTTTGGCTTTG 11236798
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| ||| || || || ||||| || | ||||| ||||| |
Sbjct 11236799 ACATTCTCGATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCTGTCAGGGCC 11236858
Query 27231 TTCACAAAGATTTGCATAGCTGC 27253
||||||||||| ||||| ||||
Sbjct 11236859 TTCACAAAGATCTGCATCTCTGC 11236881
>seq78
Length=14163838
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| | |||| |||| |||| ||| | || || ||||| || || ||||||||
Sbjct 4568723 TGCCATCACGCAGACGCAGCACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 4568782
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| |||| | || || |||||||||| || |||| |||||||||| || ||
Sbjct 4568783 AGAGAGTGCGGCCATCCTCCTGCTGTTTACCCGCAAAAATCAGACGCTGTTTGTCAGGGA 4568842
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||||| || || ||| ||| ||| | | | | ||||| ||| || |
Sbjct 4568843 GGATACCCTACTTGTCTTGGATTTTGGCTTTGATATTCTGGATGGTGTCACTGGGCTCCA 4568902
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || |||| || | ||||||||||| || ||||||||||| ||||| ||||
Sbjct 4568903 CCTCAGGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 4568957
>seq126
Length=9965562
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || |||| |||| |||| || | || || ||||| || || ||||||||
Sbjct 8584645 TGCCACCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 8584704
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| |||| | || || |||||| |||| | |||| ||| |||| || || || |
Sbjct 8584705 AGAGAGTGCGGCCATCCTCCAGCTGTGTACCCTCAAAAATCAGATGCTGCTGGTCAGGGG 8584764
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| || || ||| ||| ||| | | || | ||||| ||| || |
Sbjct 8584765 GGATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCCA 8584824
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || ||||| || | ||||| |||| || ||||||||||| |||||
Sbjct 8584825 CCTCAAGAGTGATGGTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 8584873
>seq172
Length=7263250
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| ||||| | | ||| || | ||| | || || || |||||||||||||||||
Sbjct 740225 GCCACCGCGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATATTGTAGTCAGA 740166
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| | |||| | ||||| || || || || || |||| || | ||| ||||| || ||
Sbjct 740165 CAGGGTGCGTCCATCTTCTAGTTGCTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGAGG 740106
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || || ||||| ||||||| || | ||| || || || | || ||| ||
Sbjct 740105 AATTCCTTCCTTATCATGGATCTTGGCCTTTACATTTTTTATTGTATCCGAGGGTTCGAC 740046
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| ||||| || | || || || || ||||| || || || | |||
Sbjct 740045 CTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTTACGAAAATCTTCAT 739998
>seq66
Length=17239560
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||| || | || || ||||| || || |||||||| | | || |
Sbjct 7151398 CGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTTCGGCCA 7151339
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || ||||||||||| || |||| ||||| || || || || | | |||||| ||
Sbjct 7151338 TCCTCCAGCTGTTTACCCGCAAAAATCAGACGTTGCTGGTCAGGGAGGATACCCTCCTTG 7151279
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| ||| ||| | | || | |||| ||| || || || ||||| ||
Sbjct 7151278 TCTTGGATTTTGGCTTTGACATTCTCGATGATGTCACTGGGCTCCACCTCAAGAGTGATG 7151219
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||||||||||| || ||||||||||| |||||
Sbjct 7151218 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 7151184
>seq45
Length=21324102
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || |||||||| | |||| | || || ||||||||| |
Sbjct 18625455 GTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTAGCC 18625396
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| ||| ||||||| ||||| || || | ||||| || || ||| ||| |||
Sbjct 18625395 GCAAAAACCAGACGCTCCTGATCAGGGGGGATACCCTACTTGTCTTGGATTTTGGCTTTG 18625336
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | | ||||| ||| || || || ||||| || | ||||||||||| ||
Sbjct 18625335 ACATTCTTGATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTC 18625276
Query 27231 TTCACAAAGATTTGCATAGCTGC 27253
||||||||||| ||||| ||||
Sbjct 18625275 TTCACAAAGATCTGCATCTCTGC 18625253
>seq31
Length=26307832
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || |||| |||| |||| | | || || ||||| || || ||||||||
Sbjct 23303230 TGCCACCACGCAGACGCAGAACCAGGGGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 23303289
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| |||| | || || |||||||||| || |||| |||||||| || || | |
Sbjct 23303290 AGAGAATGCGGACATCCTCCAGCTGTTTACTCGCAAAAATCAGACGCTGCTGGTCAGTGG 23303349
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| || || ||| ||| ||| | | | | ||||| | | || |
Sbjct 23303350 GGATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTGGATGGTGTCACTAGGCTCCA 23303409
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || || || || | ||||||||||| || ||||||||||| ||||| ||||
Sbjct 23303410 CCTCAAGGGTAATGGGCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 23303464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424828232796000
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