Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq7 104 3e-17
seq30 95.1 1e-14
seq131 84.2 2e-11
seq58 84.2 2e-11
>seq7
Length=39982324
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| |||| || |||| ||||||||||||| || | |||||| || ||
Sbjct 25627201 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTCGTACCAAACTGA 25627260
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| ||||||||| || || ||| ||||||||| || |||||||| |||| |
Sbjct 25627261 CCAATAGGCTGCAAGAGGTTTAGATTATTGCTGCCCACAAAATTCTGAGCCAAATTGATA 25627320
Query 117425 ATCGT 117429
|| ||
Sbjct 25627321 ATGGT 25627325
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | || || | |||||||||||| ||||| ||| ||||||||
Sbjct 25627201 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTCGTACCAAACTGA 25627260
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| |||| | |||||| || || ||| |||||| ||||||||||||||||| | |
Sbjct 25627261 CCAATAGGCTGCAAGAGGTTTAGATTATTGCTGCCCACAAAATTCTGAGCCAAATTGATA 25627320
Query 152149 ATCGT 152153
|| ||
Sbjct 25627321 ATGGT 25627325
>seq30
Length=26211398
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| |||||||||||| |||||||| ||| || || || || ||
Sbjct 15923285 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCGTGAAGCCGAGTTCCAAACTGA 15923226
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| | | ||| | |||||| ||||||||||| |||||||| || |||
Sbjct 15923225 CCAATAGGCTGAAGTAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 15923166
Query 117425 ATCGT 117429
|| ||
Sbjct 15923165 ATAGT 15923161
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| || || || | ||| || ||||| |||||||| ||||| |||||||||||
Sbjct 15923285 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCGTGAAGCCGAGTTCCAAACTGA 15923226
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| |||| || | ||| | |||||| ||||| || ||||||||||||||||||
Sbjct 15923225 CCAATAGGCTGAAGTAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 15923166
Query 152149 ATCGT 152153
|| ||
Sbjct 15923165 ATAGT 15923161
>seq131
Length=9795181
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| ||||| | || |||||||| ||||| ||||||||
Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| ||| || || | || |||||| |||||||| ||||| || ||||||||
Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613
Query 74892 ACAA 74895
||||
Sbjct 9778614 ACAA 9778617
>seq58
Length=18876681
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| ||||| | || |||||||| ||||| ||||||||
Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| ||| || || | || |||||| |||||||| ||||| || ||||||||
Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572
Query 74892 ACAA 74895
||||
Sbjct 18847571 ACAA 18847568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547075775900000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |