Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 7e-13 >seq14 Length=34905451 Score = 89.7 bits (98), Expect = 7e-13 Identities = 184/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336 ||||| || |||||||| || | ||||||||||| | || || || | |||| || Sbjct 23451522 GACACCTATAGCCCCGATGAATATCTGTGGGCCACTATTCAAAGGATT--CCAGACGTCC 23451579 Query 14337 GGGGGGATCCCCGTTCA--CGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394 || | | || |||| || || |||||||| || |||||| || | |||| Sbjct 23451580 CTGGCGCACTCCCTTCAAACGATAAATACGACACATCTGACATGCACGCGTTTGCAAGGT 23451639 Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454 | ||||| |||||||||| || || ||| | || || |||| ||||| || ||| Sbjct 23451640 TTGTCAAATGGCACTACTTTGAAGGCGATGTTTCCAAGGGCGCCCCCTACCCACCCTGCA 23451699 Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAGA 14514 |||||||| || | | || | ||| | || ||| | || || |||| ||| || Sbjct 23451700 GTGGCATCCATGTGCGCTCCGTGTGCGTTTTTGGGGCAGGGGATTTGAACTGGATGTTAC 23451759 Query 14515 GCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 || | ||| |||| ||||||||||| ||| Sbjct 23451760 GCAAACACCACTTGTTTGCCAACAAGTTTGAC 23451791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658570398080000