Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 4e-13
seq281 86.0 4e-12
>seq8
Length=38990876
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA---AG 27845
|||||| || |||||||||||||| | || ||||||||||| |||| | || ||
Sbjct 11065684 AATGCAGATCTTTGTGAAAACTCTCATGGGTAAATGTATTACCCTTGAGCTAGAGCCCAG 11065625
Query 27846 CACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGA 27905
| | || || | ||| ||||| || ||| ||||||||||| | || ||
Sbjct 11065624 GAAC-ACCATTGAGAAT--GTCAAGGCGAAGATACAAGACAAAGAAGGCATCCCTCCTGA 11065568
Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965
||||| | || || ||||| || ||||| |||| || ||||| | | |||| | ||
Sbjct 11065567 CCAGCAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGATGAACGTACCCTGTCTAACTA 11065508
Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||| ||||| ||| |||| ||||| || |||| | || ||
Sbjct 11065507 CAACATCCAGAAAGAATCCACCCTGCACTTGGTCCGGCATTTGAGCGGAGG 11065457
>seq281
Length=3633602
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||| || |||||||||||||| || || ||| |||||| |||| || || ||
Sbjct 126707 AATGCAGATCTTTGTGAAAACTCTCACGGGTAAAACTATTACCCTTGAGGTTGAGCCCAG 126648
Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
||| || | ||| ||||| ||| || ||||||||||| | || ||
Sbjct 126647 TGACACCATTGAGAAT--GTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCTGAC 126590
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
||||| | || || ||||| || |||||| |||| || | || | |||| ||||||
Sbjct 126589 CAGCAGAGATTGATCTTTGCTGGGAAACAACTGGAAGATGGCCGTACTCTGTCTGATTAC 126530
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| ||||| ||| |||| |||| | ||| || | || ||
Sbjct 126529 AACATCCAGAAAGAATCCACCCTGCACCTGGTCCTTCGTCTGAGAGGGGG 126480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355773490003500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |