Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq340 89.7 2e-13
seq103 84.2 8e-12
>seq340
Length=2708488
Score = 89.7 bits (98), Expect = 2e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 52112 GGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTG 52171
|||| || ||||||||||| | || | ||| || ||||| | | ||| |||| || ||
Sbjct 2584898 GGCGCTGCCTCCCTGCCATGCCCTTTGCCAGTTTTATGTGGTAAACGGTGAGCTGTCCTG 2584839
Query 52172 CCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTA 52231
|| |||| |||||||| | ||||| |||||| || || || ||||||||||||||
Sbjct 2584838 TCAGCTGTACCAGCGGTCAGGACACATGGGCTTGGGGGTGCCTTTCAACATTGCCAGCTA 2584779
Query 52232 TTCCTTGCTGACGCATCTGATTGC 52255
||| ||| || | |||||||
Sbjct 2584778 CGCCTGGCTTACCTACATGATTGC 2584755
>seq103
Length=11749778
Score = 84.2 bits (92), Expect = 8e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169
|||||| || ||||||||||| | || | ||| |||||||| | | ||| |||| ||
Sbjct 7749955 ATGGCGCTGCCTCCCTGCCATGCCCTTTGCCAGTTCTATGTGGTAAATGGTGAGCTGTCC 7749896
Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229
|| | |||| ||| |||| | |||||| | |||| || || || ||||||||||||
Sbjct 7749895 TGTTAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGGGTGCCTTTCAACATTGCCAGC 7749836
Query 52230 TATTCCTTGCTGAC 52243
|| || |||| ||
Sbjct 7749835 TACGCCCTGCTCAC 7749822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190049723505000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |