Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq25 199 4e-46 seq51 183 3e-41 seq92 141 1e-28 seq1 84.2 2e-11 >seq25 Length=39250790 Score = 199 bits (220), Expect = 4e-46 Identities = 406/600 (68%), Gaps = 5/600 (1%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||| ||||| || || || || || | || || ||||| |||||||| |||||| Sbjct 34005673 AGGTGTTTGAACATGAGGCAGGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGT 34005614 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || ||||| || | || ||||| |||||||||||| | ||| || || | || Sbjct 34005613 TCCTTGGAAAACGTGAGGCCTGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCA 34005554 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 ||||| || || ||||| || || || || | |||||| || | | ||| || |||| Sbjct 34005553 AACGAACCGGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAG 34005494 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 || || ||||||| | |||||| | |||| || || || | ||| | ||| | Sbjct 34005493 GTAGCTTCTTTGTCGCCAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGC 34005434 Query 17186 ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCG 17245 || || || ||| | || || | | ||| |||||| | | | ||| | || || Sbjct 34005433 ATTGTCTCAATGACATTGAAGAGATACTCCCTTTCCT-TGGAACCTTTA---ATGTGTCA 34005378 Query 17246 ATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAG 17305 || || || || |||||||| || |||||||| ||||| || || || || || || || Sbjct 34005377 ATCAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAA 34005318 Query 17306 CATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACG 17365 || ||||| || | || |||||||| | ||||| ||| | || || || | ||| Sbjct 34005317 CAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAGGTTCTCATGCACT 34005258 Query 17366 ATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGT 17425 ||| | || || | || || || |||| || ||||||| | | || || || Sbjct 34005257 ATG-CATCACTGGTTGCAAAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCAGGC 34005199 Query 17426 GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAA 17485 | || | ||||| || |||| || | ||||| || |||| |||||||| Sbjct 34005198 TTCAGGGCTTCCCAGTGCTGAGTGGCTTTAGAAAGATCCAGCTCCTCGGCCGTCCAAAAG 34005139 Query 17486 CTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 ||| | || || |||||||| | |||||| |||| ||| | ||||| || |||||| Sbjct 34005138 GAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCATGGTACTCGATGGGAAAGACAACA 34005079 >seq51 Length=16359109 Score = 183 bits (202), Expect = 3e-41 Identities = 569/875 (65%), Gaps = 8/875 (1%) Strand=Plus/Plus Query 16667 CCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGAT 16726 ||||| || || || |||| || | || || || ||||| || || || || || || Sbjct 9671624 CCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAC 9671683 Query 16727 ATATTCTCCATGAAATCAAAAGGATTAGTAGCT--GAAAATATTTTAGAGTACCCCAGTT 16784 || |||||||| || ||||| || || || ||| | || | | | ||||||| Sbjct 9671684 ATGTTCTCCATAAAGTCAAATGGGTTTTCTACTTTGAACAGCTTGTTAA--AACCCAGTT 9671741 Query 16785 CGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTC 16844 | |||| || || || || ||||| || | || ||| || ||| ||||||| Sbjct 9671742 CCAGCATTAGCCTGTCTGCCACGAATTCAATGTGCTGTGTCATCAAAGTGCAATTCATTC 9671801 Query 16845 CTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCT 16904 | || || | || | |||||||| | ||| || |||| || || | | Sbjct 9671802 CAATCAGTTTCAAGGGCAAGGCTTCCGTAAGGAATTCCTGTTCTACTCTGACAGCATTCA 9671861 Query 16905 TAATAATA-CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGA 16963 ||| || || | | ||| | ||| || ||| | || || ||||| |||| || Sbjct 9671862 CAATGATTTCTTGTA-CTCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAACACGAGG 9671920 Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || || || || || || ||||| ||||||| |||| ||| || ||||| || | Sbjct 9671921 CAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCGAATAACTTCATTGGAAAACGTGAGG 9671980 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || ||||| ||||| |||||| | ||| || || | ||| ||||| || || ||||| Sbjct 9671981 CCTGGCATTAGTCCTCCTTTCTTGAGCCAGAAGATGGAGGCAAACGAACCGGAGAAGAAG 9672040 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 || || || || | |||||| || | | || || | || || ||||||| | | Sbjct 9672041 ATGCCTTCCACTGCTGCAAAGGCTACAACTCTCTCTCCATAGGTACTTTCTTTGTCGCCA 9672100 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203 ||||| | |||| || || || | ||| | ||| ||| || || |||| | Sbjct 9672101 ATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCCGTGGCACTG 9672160 Query 17204 AATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263 || | | ||| |||| | || | || || || || || || || || |||||| Sbjct 9672161 AAGAGATACTCCCTTTCTTTGGACTCTTTAATGTAAGTGTCAATCAGGAGACTATACATT 9672220 Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323 || || |||||||| ||||| || || || || || || || | ||||| || | || Sbjct 9672221 TCAGAATGTATGTTATCCATTGCAATTTGGAAACCATAGAACTAGCGGGCCTCTGTAATC 9672280 Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383 |||| || | ||||| ||| | || ||||| | |||||||||||| || || || Sbjct 9672281 TGAATGTCTTGGCTAAATCGCTCCACCAGGTTTTCATGCACGATGCCGTCACTGGCTGCA 9672340 Query 17384 AAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCC 17443 || || |||| || ||||||| | | || || || || | ||||| | Sbjct 9672341 AAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCAGGCTGCAGGGCTTCCCAGTGC 9672400 Query 17444 TTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTA 17503 | | ||||| || | |||||| | |||| |||||||| ||| | || || ||| Sbjct 9672401 TGAATGTCTTTAGAAAGATCCAC--CCTCGGCCGTCCAAAAGGAGGCCTCAGCTTTCTTA 9672458 Query 17504 TACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| | |||||| ||| ||| | ||||| || Sbjct 9672459 TACATCTGCCAAATGCCATGGTACTCGATGGGAAA 9672493 >seq92 Length=6660306 Score = 141 bits (156), Expect = 1e-28 Identities = 556/867 (64%), Gaps = 42/867 (5%) Strand=Plus/Plus Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723 || ||||| | | ||| |||| || | || || || ||||| || || || || || Sbjct 3253973 ACTCCCATCTTCTAGTACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGG 3254032 Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAGTAGCT--GAAAATATTTTAGAGTACCCCA 16781 || || |||||||| || ||||| || || || ||| || || | || |||| | Sbjct 3254033 GAAATGTTCTCCATAAAGTCAAATGGGTTTTCTACTTTGAACATCTTGTTGAA-ACCCAA 3254091 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 | | | | ||| || || || || ||||| || || | |||||| ||| |||| Sbjct 3254092 TTCCAGTG-TTAGCCTGTCTGCCACGAATTCAATGTACTATGTCATTAAAGTGCAATTCA 3254150 Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901 |||| || || || | || || ||||||| ||| || ||| | || || | Sbjct 3254151 TTCCAATCAGCTTCACGTGCAGGGCCTCCGTCAGGAATTCCTGTTCTCTCCTGACAGCAT 3254210 Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACAT 16959 | | || | || | | ||| | ||| || || || ||| | || ||||| |||| Sbjct 3254211 TCATGAT--TTCTTGTA-CTCTCTGCTCCGAAGG-GT-TGTACAGCAGGTGTTTGAACAC 3254265 Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 || || || ||||| || || || ||||| |||||||| |||||||| || ||||||| Sbjct 3254266 GAGGCAGGCAAAATCACATTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGA 3254325 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | || ||||| |||||||||||| | ||| || || | || || || |||| | Sbjct 3254326 GAGGCCAGGCATTAGTCCTCGTTTCTTGAGCCAGAAAATGGATGCAAATGAACCAG---A 3254382 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| || || || || | ||||| || | | ||| | | || || | |||||||| Sbjct 3254383 GAAGATTCCTTCCACTGTCGCAAAGGCTACAACTCGCACTCCATAGGTAACTTCTTTGTT 3254442 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | |||||| | |||| || || || ||| | ||| ||| |||| |||| Sbjct 3254443 TCCAATCCAACGCAAGGCCCAATCTGCCTTCACCTTCACACAAGGCATTGTTTAAGTGGC 3254502 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || || | | || |||||| || | ||||| || || ||||| || | || Sbjct 3254503 ATTGAAGAGATATTCCCTTTCCTTGGAATCTTTAATATAAGTGTCAATGAGGAGATTATA 3254562 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 |||||| || || ||||| ||||| | || || || || | || || Sbjct 3254563 CATTTCAGAATGGATGTTTTCCATAGTAATTTGGAAGCCACAGAAACA------------ 3254610 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 || || | | ||||| ||| | || || || ||||| |||| || || || Sbjct 3254611 ----GAAATTTATAGGCTAAATCGCTCCACCAGGTTCTCATTCACTATGCTATCACTGGC 3254666 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCA 17439 || || || | || | || | ||||||||| | || || || | ||| Sbjct 3254667 TGCAAAGAAAG--AACGTGTGAT--ATGAAATATCTCTCCTCAGG--------CTTCCCA 3254714 Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499 || || | ||| || || | |||||| || |||| |||||||| |||| | || || Sbjct 3254715 GTGCTGAATATCGTTAGACAGATCCACCTCCTCGGCCGTCCAAAAGGAAGCCTCAGCTTT 3254774 Query 17500 TTTATACATATTCCAAATATCATTGTA 17526 |||||||| | |||||| |||| ||| Sbjct 3254775 CTTATACATCTGCCAAATGTCATGGTA 3254801 >seq1 Length=111700974 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||||||||| || ||||| || | || ||||| |||||| |||| Sbjct 4139653 CCTCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATTAGTCCTCGCTTCT 4139594 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || | ||| || || || || ||||| || || || || | |||||| | Sbjct 4139593 TGAGCCAGAAGATGGAGGCAAATGAACCGGAGAAGAAGATGCCTTCCACTGCTGCAAAGG 4139534 Query 17106 C 17106 | Sbjct 4139533 C 4139533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517491244773360