Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq21 214 1e-50 seq4 167 2e-36 seq34 154 1e-32 >seq21 Length=45764842 Score = 214 bits (236), Expect = 1e-50 Identities = 493/734 (67%), Gaps = 18/734 (2%) Strand=Plus/Plus Query 18610 ATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGT 18669 ||||||| ||||| | || || |||||||| || |||| || || |||| |||||| Sbjct 37391747 ATGAATTCCCTCTGCTGACAACCAAGCGTGTGTTCTGGAAGGGTGTTCTGGAGGAGTTGC 37391806 Query 18670 TATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATAT 18729 | ||||||||| || || ||| || | ||||||||| || | || | | | || | Sbjct 37391807 TGTGGTTTATCAAGGGATCCACCAATGCTAAAGAACTCTCCTCCAAGGGAGTGAAGATCT 37391866 Query 18730 GGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGG 18789 ||| | | || || | | | |||| | || | | || | ||| | Sbjct 37391867 GGGGTGCCAATGGGTCCCG-AGACTTCT---TGGGGTTCTCGACCCGAGAAGGA-----G 37391917 Query 18790 GGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACT 18849 | || | ||||| | || ||||| |||||||||||||| || || ||||||||||| | Sbjct 37391918 GAGATTTAGGCCCAGTCTATGGCTTTCAGTGGAGACATTTCGGGGCTGAATATAAAGA-T 37391976 Query 18850 GTCAA-TCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 | || ||| | || | | |||||| | | ||||| |||| |||| || ||||| Sbjct 37391977 ATGAATTCAGATTACTCAGGCCAAGGAGTACACCAGCTACAAAAGGTTACTGACACAATC 37392036 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 ||||| ||||| || ||| || || || | |||| ||||||| || | || Sbjct 37392037 AAAACCAACCCCGA----TGACAGATCATCATGTGTGCTTGCAATCCAAGAGACCTTCCT 37392092 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 ||||| || ||||| || ||| | | || ||||| || || | || ||||| | Sbjct 37392093 CAGATGGTGCTGCCTCCTTGCCACGCCCTCTGCCAGTTCTATGTGGTGAATGGTGAGCTG 37392152 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 ||||| || | |||||||| || || || |||||||| ||||| || |||||||| || Sbjct 37392153 TCCTGACAGCTGTACCAGAGGTCAGGTGACATGGGCCTGGGGGTGCCTTTCAACATCGCC 37392212 Query 19089 GGATATGCACTTCTTACCTAC-ATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTT 19147 | || | | || |||||| || | || || | ||||| || || | || || || Sbjct 37392213 AGCTACACCTTGCTCACCTACAATGATCGCACACATCACAGGCCTGAAGCCAGGTGACTT 37392272 Query 19148 AATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCA 19207 | |||||| ||| ||||| ||||||||| |||||||| | || | | ||||| || Sbjct 37392273 TGTACATACATTGGAAGATGCGCATATTTACCTGAATCATGTTGAACCCCTGAAAGTTCA 37392332 Query 19208 GCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA-TA 19266 ||| ||| |||| || ||||| || || ||| | || || || ||| | Sbjct 37392333 GCTCCAGCGAGAACCAAGACACTTTCCCAAGCTCAATATTCTGCGGAAAGT-TGAGACCA 37392391 Query 19267 TAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAA 19326 | | ||||| ||| || || || ||| |||| ||||| || || ||||| | | | Sbjct 37392392 TTGATGACTTCAAAGCTGAAGACTTCCAGATTGAAGGATACAACCCTCACCCAACTATTA 37392451 Query 19327 AAATGGAAATGGCT 19340 |||||||||||||| Sbjct 37392452 AAATGGAAATGGCT 37392465 >seq4 Length=91125384 Score = 167 bits (184), Expect = 2e-36 Identities = 502/765 (66%), Gaps = 9/765 (1%) Strand=Plus/Minus Query 18579 TTTGGAATGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTTTTAACTACAAAGCGT 18638 ||||| ||| | || | |||| ||| || ||||||| ||||| | || || |||| | Sbjct 20113366 TTTGGCATGTAGGCGTGCTACAGCTTGAGAGATGAATTCCCTCTACTGACAACCAAGCAT 20113307 Query 18639 GTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCC 18698 || || |||| || || |||| |||| | | ||||||||| || || | | | | Sbjct 20113306 GTGTTCTGGAAGGGTGTTCTGGAGGAGTCGCTGTGGTTTATCACGGGATCCAACAAAGCT 20113247 Query 18699 AAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGATCGAGCAAATTTCTA 18758 ||||||||| || | || | | | |||||| | || || | | | |||| Sbjct 20113246 AAAGAACTCTCCTCCAAGGGAGGGAAGCTCTGGGATGCCAAGGGGTCACG-AGACTTCTC 20113188 Query 18759 AATAGGAATGGC-TTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCA 18817 | || ||| ||| || || | || || | ||||| | || ||||| || Sbjct 20113187 AGAGGGCCTGGGGTTCTGTACCGGAGAAGAAGGAGATTTAGGCCCAGTCTATGGCTTTCA 20113128 Query 18818 GTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAAT-CAAACTATTTACAGCAAGGAA 18876 | ||| ||| |||| | ||||||||||| | | ||| || | || | | |||||| Sbjct 20113127 GCAGAGCCATGTTGGGACTGAATATAAAGA-TATGAATTCAGATTACTCAGGTCAAGGAG 20113069 Query 18877 TCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGA 18936 | || |||||||||| || | || ||||| ||||| ||||| || | || ||| | Sbjct 20113068 TAGACCAGCTGCAAAAGGTCACTGACACAATCAAAACCAACCCTGATGACAGAAGAACCA 20113009 Query 18937 TTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGT 18996 | | | |||||||| | | || | || ||||| || ||||| || | | | Sbjct 20113008 TCAGGTGTGCTTGGAATTCTAGAGACCTTCCTCAGATGGTGCTGCCTCCTTGCCTCGCCC 20112949 Query 18997 TATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGG 19056 | || ||||| | | | | |||| | || | |||||||| | ||| |||| || || | Sbjct 20112948 TCTGCCAGTTCTGCATGGTAAACAGCGAGCTGTCCTGCCAGCTGTACTAGAGGTCAGGTG 20112889 Query 19057 ATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAG 19116 | ||||| || ||||| || |||||||| || | || || | || ||||| || | Sbjct 20112888 ACATGGGTCTGGGGGTGCCTTTCAACATCGCCAGCTACGCCTTGCTCACCTATATGATCA 20112829 Query 19117 CGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTT 19176 | || | |||| || ||| | || || || | ||||| |||| ||||||||||||| Sbjct 20112828 CACACATAACAGTCCTGAAACCAGGTGACTTTTTACATACGTTGGGAGATGCACATATTT 20112769 Query 19177 ACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTT 19236 || ||||||| | || | | ||||| ||||| ||| |||| |||||| || Sbjct 20112768 ACCTGAATCACGTTGAACCCCTGAAAGTTCAGCTCCAGCGAGAACCAAGACCTTTCCCCA 20112709 Query 19237 GCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACGATTTTCAG 19295 || || ||| | |||| || ||| ||| | || || ||| || || || ||| Sbjct 20112708 AGCTCAACATTCT--GAAAAGT-TGAGACTATTGATGATTTCAAAGCTGAAGACTTCCAG 20112652 Query 19296 CTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCT 19340 || | ||||| || || || || | | ||||||| ||||||| Sbjct 20112651 ATTCAAGGATACAACCCTCATCCAACTATTAAAATGG-AATGGCT 20112608 Score = 140 bits (154), Expect = 3e-28 Identities = 417/638 (65%), Gaps = 4/638 (1%) Strand=Plus/Minus Query 18549 GATCGAACAGGAATCGGAACGTTATCTTTATTTGGAATGCAAGCTCGATACAATTTGCGA 18608 || || ||||| | ||| || | ||| | ||||| || || || | |||| ||| | Sbjct 20154264 GACCGCACAGGCACCGGTACCCTGTCTGTGTTTGGCATACAGGCGTGTTACAGCTTGAGT 20154205 Query 18609 AATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTG 18668 ||||| | | ||| | || | |||||||| || |||| || | |||| |||| | Sbjct 20154204 GATGAAGTCCTTCTGCTGACAGCCAAGCGTGTGTTCTGGAAGGGTGCTCTGGAGGAGTCG 20154145 Query 18669 TTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATA 18728 | ||||||||| || || ||| | | ||||||||| || | || | | | Sbjct 20154144 CTGTGGTTTATCACGGGATCCACCAAAGCTAAAGAACTCTCCTCCAAGGGAGGGAAGCTC 20154085 Query 18729 TGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGC-TTCCATAAAAGACACAC 18787 |||||| | || || | | | |||| || ||| ||| || || | Sbjct 20154084 TGGGATGCCAAGGGGTCACG-AGACTTCTTGGAGGGCCTGGGGTTCTGTACCTGAGAAGA 20154026 Query 18788 GGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 || || | ||||| | || ||||| |||||||| ||| |||| || ||||||||||| Sbjct 20154025 AGGAGATTTAGGCCCAGTCTATGGCTTTCAGTGGAGCCATGTTGGGGCTGAATATAAAGA 20153966 Query 18848 CTGTCAAT-CAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAA 18906 | | ||| | | || | | ||||| || | |||||||| || | || |||| Sbjct 20153965 -TATGAATTCTGATTACTCAGGTCAAGGTGCAGACCTGCTGCAAAAGGTCACTGACACAA 20153907 Query 18907 TTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCC 18966 | ||||| ||||| || | || ||| || | | |||||||| | | || | | Sbjct 20153906 TCAAAACCAACCCTGATGACAGAAGAACCATCAGGTGTGCTTGGAATTCTAGAGACCTTC 20153847 Query 18967 CCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAAT 19026 | ||||| || ||||| || | | | | || ||||| | ||| | ||| | || Sbjct 20153846 CTCAGATGGTGCTGCCTCCTTGCCTCGCCCTCTGCCAGTTCTGCGTGGTGAACAGCGAGC 20153787 Query 19027 TATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTG 19086 | |||||||| | |||||||| || || || ||||| || | ||| || |||||||| | Sbjct 20153786 TGTCCTGCCAGCTGTACCAGAGGTCAGGTGACATGGGTCTGGCGGTGCCTTTCAACATCG 20153727 Query 19087 CTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATT 19146 | | || || | || |||||||| | || || | |||| || || | || || | Sbjct 20153726 CCAGCTACGCCTTGCTCACCTACATGATCGCACACATAACAGTCCTGAAGCCGGGTGACT 20153667 Query 19147 TAATTCATACAATGGGGGATGCACATATTTACTTGAAT 19184 | | ||||| |||| ||||||||||||||| ||||| Sbjct 20153666 TTTTACATACGTTGGGAGATGCACATATTTACCTGAAT 20153629 Score = 136 bits (150), Expect = 3e-27 Identities = 361/545 (66%), Gaps = 16/545 (3%) Strand=Plus/Minus Query 18798 GGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA-TC 18856 ||||| | || ||||| |||||||||||| |||| || ||||||||||| | | || || Sbjct 20066156 GGCCCAGTGTATGGCTTTCAGTGGAGACATGTTGGGGCTGAATATAAAGA-TATGAATTC 20066098 Query 18857 AAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAA 18916 | | || | | ||||| || | |||||||| || || || ||||| |||| || Sbjct 20066097 AGATTACTCAGGTCAAGGTGCAGACCTGCTGCAAAAGGTAATTGACACAATCGAAACCAA 20066038 Query 18917 CCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGT 18976 ||| || | || ||| || |||| ||||||| | | || | || ||||| Sbjct 20066037 CCCTGATGACAGAAGAACCATCATATGTGTTTGGAATTCTAGAGACCTTCCTCAGATGGT 20065978 Query 18977 ACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCA 19036 || ||||| || ||||| | || ||| ||| | | | ||| | || | |||||||| Sbjct 20065977 GCTGCCTCCTTGCCACACCCTCTGCCAG-TTTGCCTGGTGAACAGCGAGCTGTCCTGCCA 20065919 Query 19037 AGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGC 19096 | |||||||| || || || ||||||| |||||| || ||||||| || Sbjct 20065918 GCTGTACCAGAGGTCAGGTGACATGGGCC-TGGGGTGCCTGTCAACATGGC--------- 20065869 Query 19097 ACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATAC 19156 | || ||||| | | || || | ||||| || || | || || || | || | Sbjct 20065868 -CAGCTCACCTATGTGATCGCACACATCACAGGCCTGAAGGCAGGTGACTTCGTACACAT 20065810 Query 19157 AATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 | | ||||||||||||||| |||||||| | || | | ||||| ||||| || Sbjct 20065809 GTTCAGAGATGCACATATTTACCTGAATCATGTTGAACCACTGAAAGTTCAGCTCCAGCG 20065750 Query 19217 ATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACT 19275 | |||| ||| || || || || ||| | |||| || ||| | | || | Sbjct 20065749 AGAACCAAGACCGTTCCCCAAGCTCAACATTCTGTGAAAAGT-TGAGACCACTGATGATT 20065691 Query 19276 TTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAAA 19335 | ||| | || || || ||| || | ||||| || || || || | | |||||||||| Sbjct 20065690 TCAAAGGTGAAGACTTCCAGATTCAAGGATACAACCCCCATCCAACTATTAAAATGGAAA 20065631 Query 19336 TGGCT 19340 ||||| Sbjct 20065630 TGGCT 20065626 >seq34 Length=22856737 Score = 154 bits (170), Expect = 1e-32 Identities = 285/414 (69%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 18798 GGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCA 18857 ||||| | || ||||| ||||||||||||||||| || |||||||||| | | ||| Sbjct 22207867 GGCCCAGTCTATGGCTTTCAGTGGAGACATTTTGG-GCTAAATATAAAGATAGGAATTCA 22207809 Query 18858 AACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAAC 18917 | || | | |||||| | || |||||||||| |||| || ||||| ||||| ||| Sbjct 22207808 GATTACTCAGGCCAAGGAGTAGACCAGCTGCAAAAGGTTACTGACACAATCAAAACCAAC 22207749 Query 18918 CCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTA 18977 || || |||| |||| || | | |||||||| |||| || | || ||| Sbjct 22207748 CCTGATGACCGAAGAATCATCAGGTGTGCTTGGAATTCAAAAGACCTTCCTCAGGTGGCG 22207689 Query 18978 CTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAA 19037 || ||||| || ||| | || | ||| | | | | || || || | |||||||| Sbjct 22207688 CTGCCTCCTTGCCACGCTCCCTGCCCGTTCTGCATGGTGAATGGCGAGCTGTCCTGCCAG 22207629 Query 19038 GTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCA 19097 | || ||||| || || || |||||||| || | | |||||||| || | || || Sbjct 22207628 CTGTAGCAGAGGTCAGGTGACATGGGCCTGAGGTTGTCTTTCAACATCGCCAGGTAAGCC 22207569 Query 19098 CTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCAT-AC 19156 | || | |||||| | || || | ||||| || || | || || || | ||| || Sbjct 22207568 TTGCTCATCTACATGATCGCACACATCACAGGCCTGAAGCCAGGTGACTTTGTACATAAC 22207509 Query 19157 AATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCT 19210 |||| |||||||||||||||||| ||||| | || | | ||||| ||||| Sbjct 22207508 GTTGGGAGATGCACATATTTACTTG-ATCATGTTGAACCCCTGAAAGTTCAGCT 22207456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399463091040090