Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq98 473 1e-128 seq21 398 9e-106 seq1 203 4e-47 seq9 176 5e-39 seq67 159 4e-34 seq65 149 8e-31 seq74 98.7 1e-15 seq5 86.0 8e-12 >seq98 Length=6048164 Score = 473 bits (524), Expect = 1e-128 Identities = 476/617 (77%), Gaps = 1/617 (0%) Strand=Plus/Plus Query 83053 GGGGAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCT 83112 || ||||||| ||| |||||||||||| | | | | ||| || ||||| |||||||||| Sbjct 2317728 GGAGAGCAGGACCTGGATGTCGGGCTCGATGTCGATGGTGGGGAAGCGGCGGCTGTACCT 2317787 Query 83113 GCGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTT 83172 |||||| ||| || || ||||||| |||||||||||||||||| | | |||||| Sbjct 2317788 GCGCACAGGCACACCATCGCGGCCCACCAGGAACTTCTCGAAGTTCCAAGAGATGTCGTT 2317847 Query 83173 GCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTC 83232 ||||||||| || ||||||| || |||| ||||||| ||| ||| | | | ||||| Sbjct 2317848 GCGGCACACGGGCGACCAGGTGATAAGCTTGGGGTCGGTCATGAGGGAGGTGGCATCGTC 2317907 Query 83233 GCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTT 83292 ||| |||||||||| |||||| || |||||||| |||||||| ||||| | || ||||| Sbjct 2317908 GCTGGGCGCCGGCAAGGCCTCCCGGAGGAAGGCAAAGAGCGGGTGTGCATTGGCGCCGTT 2317967 Query 83293 GACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTG 83352 |||||||||||||| || || ||||| |||||||| ||| ||||| |||||||| Sbjct 2317968 CACCTCGCACTTCTCAAACAGGCAGAAGTTGGGCTCGAACCCGCCGCCAGGTCGGACGTG 2318027 Query 83353 CTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACA 83412 ||| |||||| || ||||| | |||| | ||| ||||| || || |||||||| || Sbjct 2318028 CTTGAGGGAATTCAGAATCTCTTCGTTCTTGCTGTTCTCCTGATGCCCAAACTGGTTGCA 2318087 Query 83413 CGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTG 83472 |||||| || ||||| ||||| ||||| | || |||||||||||||| ||||||||||| Sbjct 2318088 CGGGAAACCTAGCACGACCAGGCCCCGGGGGCCGAGGCGCCGCTGCAGGTCGTTCATCTG 2318147 Query 83473 AGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCG 83532 ||||| |||||||||||| | |||||||| ||||| |||||||||||||||| ||| Sbjct 2318148 GGTGTAGTCCCGGACCGTGGTGCCTCAGAGCGACGCCACGTTCTCGATGAGCAGCACCTT 2318207 Query 83533 GCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGGC 83592 |||| | | || | | ||||| | || || |||| | |||||| || |||||||| Sbjct 2318208 GCCCTGCAGCGAGGCCAGGCTCATGAGCTCCCCGCCGGCCAGCGGGCGCGCGGAGAAGGC 2318267 Query 83593 GTACACAGATCTGGTCTCTGCCGCGGCAAGCTGTGCCGCGTACTTGGCACAGAGCTCGGA 83652 |||||| || | | | |||||||| ||| | || ||| || || | | | | ||||| Sbjct 2318268 GTACACGGAGCCCGAGGCGGCCGCGGCGAGCAGAGCGGCGCACATGACGCGGGGGTCGGA 2318327 Query 83653 AAAGCGCGG-GAAGCGG 83668 | |||||| || |||| Sbjct 2318328 GAGGCGCGGAGAGGCGG 2318344 >seq21 Length=45764842 Score = 398 bits (440), Expect = 9e-106 Identities = 453/611 (74%), Gaps = 18/611 (3%) Strand=Plus/Minus Query 83053 GGGGAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCT 83112 || ||||||| ||| |||||||||||| | | | | ||| || ||||| |||||||||| Sbjct 38571753 GGAGAGCAGGACCTGGATGTCGGGCTCGATGTCGATGGTGGGGAAGCGGCGGCTGTACCT 38571694 Query 83113 GCGCACGGGCGTGC--CGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCG 83170 |||||| ||| | | || ||||||| |||||||||||||||||| | | |||| Sbjct 38571693 GCGCACAGGCACACACCATCGCGGCCCACCAGGAACTTCTCGAAGTTCCAAGAGATGTCG 38571634 Query 83171 TTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCG 83230 |||||| || |||| ||||||| ||| ||| | | | ||| Sbjct 38571633 ----------------ACCAGGTGATAAGCTTGGGGTCGGTCATGAGGGAGGTGGCATCG 38571590 Query 83231 TCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCG 83290 ||||| | ||| |||| |||||| || |||||||| |||||||| ||||| | || ||| Sbjct 38571589 TCGCTGGCCGCAGGCAAGGCCTCCCGGAGGAAGGCAAAGAGCGGGTGTGCATTGGCGCCG 38571530 Query 83291 TTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACG 83350 || |||||||||||||| || || ||||| |||||||| ||| ||||| |||||| Sbjct 38571529 TTCACCTCGCACTTCTCAAACAGGCAGAAGTTGGGCTCGAACCCGCCGCCAGGTCGGACG 38571470 Query 83351 TGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTA 83410 ||||| |||||| || ||||| | |||| | ||| ||||| || || |||||||| Sbjct 38571469 TGCTTGAGGGAATTCAGAATCTCTTCGTTCTTGCTGTTCTCCTGATGCCCAAACTGGTTG 38571410 Query 83411 CACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATC 83470 |||||||| || ||||| ||||| ||||| | || |||||||||||||| ||||||||| Sbjct 38571409 CACGGGAAACCTAGCACGACCAGGCCCCGGGGGCCGAGGCGCCGCTGCAGGTCGTTCATC 38571350 Query 83471 TGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACC 83530 || ||||| |||||||||||| | |||||||| ||||| |||||||||||||||| ||| Sbjct 38571349 TGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGCGACGCCACGTTCTCGATGAGCAGCACC 38571290 Query 83531 CGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAG 83590 |||| | | || | | ||||| | || || |||| | |||||| || |||||| Sbjct 38571289 TTGCCCTGCAGCGAGGCCAGGCTCATGAGCTCCCCGCCGGCCAGCGGGCGCGCGGAGAAG 38571230 Query 83591 GCGTACACAGATCTGGTCTCTGCCGCGGCAAGCTGTGCCGCGTACTTGGCACAGAGCTCG 83650 |||||||| || | | | ||||| || ||| | || ||| || || | | | | ||| Sbjct 38571229 GCGTACACGGAGCCCGCGGCGGCCGCAGCGAGCAGAGCGGCGCACGTGACGCGGGGGTCG 38571170 Query 83651 GAAAAGCGCGG 83661 || | |||||| Sbjct 38571169 GAGAGGCGCGG 38571159 >seq1 Length=111700974 Score = 203 bits (224), Expect = 4e-47 Identities = 213/279 (76%), Gaps = 1/279 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 39895811 CCTGATGCCCAAACTGGTTGCACGGGAAACCTAGCACGACCAGGCCCCGGGGGCCGAGGC 39895870 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||| ||||||||||| ||||| |||||||||||| | |||||||| ||||| | Sbjct 39895871 GCCGCTGCAGGTCGTTCATCTGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGCGACGCCA 39895930 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 ||||||||||||||| ||| |||| | | || | | ||||| | || || |||| Sbjct 39895931 CGTTCTCGATGAGCAGCACCTTGCCCTGCAGCGAGGCCAGGCTCATGAGCTCCCCGCCGG 39895990 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTCTCTGCCGCGGCAAGCTGTGCCG 83630 | |||||| || |||||||||||||| || | | | ||||| || ||| | || | Sbjct 39895991 CCAGCGGGCGCGCGGAGAAGGCGTACACGGAGCCCGAGGCGGCCGCAGCGAGCAGAGCGG 39896050 Query 83631 CGTACTTGGCACAGAGCTCGGAAAAGCGCGG-GAAGCGG 83668 || || || | | | | ||||| | |||||| || |||| Sbjct 39896051 CGCACATGACGCGGGGGTCGGAGAGGCGCGGAGAGGCGG 39896089 Score = 132 bits (146), Expect = 6e-26 Identities = 192/266 (72%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| || ||| Sbjct 71216696 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCCCGCCTGC 71216638 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || | |||||||||| || ||| | ||||||| Sbjct 71216637 TGGTGCACCTCTTCCCCGAGCTCTTCACCCCCGAGAACCTGCGCAAGCAGTACAACTGCA 71216578 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587 |||||| |||| ||| |||| || |||||| ||| | || | |||| ||||| Sbjct 71216577 GCGGCTCGCTGGGAAAGAAGCAG-CTGGACCCGGCCCGCATCCGGCTCATCCGCCACTAC 71216519 Query 50588 GTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGCG 50647 |||||| |||| ||||| ||| ||||| |||||||||| ||||| ||| Sbjct 71216518 GTGCAGCTGCTCTACCCGCGGGCCAAGAACGACCGCGTGTGGACGCTGGAGTTCGTGGGC 71216459 Query 50648 TGCCTGGACGAGCGCTGCCGGCGCCG 50673 ||||||||||||||||||||||| Sbjct 71216458 AAGCTGGACGAGCGCTGCCGGCGCCG 71216433 >seq9 Length=72894145 Score = 176 bits (194), Expect = 5e-39 Identities = 172/221 (78%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 83135 CCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCA 83194 ||| ||| ||||| ||||||||||| || | ||||||||||||||| || ||||||| Sbjct 34937314 CCCCCCAGGAACTGCTCGAAGTTCCGAGCGATGTCGTTGCGGCACACGGGCGACCAGGTG 34937255 Query 83195 ATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCT 83254 || |||| ||||||| ||| ||| | ||| |||| || ||||||||||||||||| Sbjct 34937254 ATAAGCTTGGGGTCGGTCATGAGAGGTGGCAT--CGTCTCTGGGCGCCGGCAGGGCCTCC 34937197 Query 83255 CGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGC 83314 || |||||||| |||||||| |||||| | || | || |||| ||||||||| || || Sbjct 34937196 CGGAGGAAGGCAAAGAGCGGGTGTGCCTTGGCGCTATTCACCTTGCACTTCTCAAACAGG 34937137 Query 83315 ATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTT 83355 |||| ||||||||| | | ||||| | ||||||||| Sbjct 34937136 CAGAAGTGCGGCTCGAACCAGACGCCAGGTCTGACGTGCTT 34937096 >seq67 Length=11082073 Score = 159 bits (176), Expect = 4e-34 Identities = 191/263 (73%), Gaps = 16/263 (6%) Strand=Plus/Plus Query 83339 CCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 || || ||||||||||| |||||| || |||| |||| | ||| ||||| || Sbjct 2553625 CCGGGTCGGACGTGCTTGAGGGAATTCAGAATCTGTTTGTTCTTGCTGTTCTCCTGATGC 2553684 Query 83399 CCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGC 83458 || |||||||| |||||||| || ||||| ||||| ||||| | || |||||||||||| Sbjct 2553685 CCAAACTGGTTGCACGGGAAACCTAGCACGACCAGGCCCCGGGGGCCGAGGCGCCGCTGC 2553744 Query 83459 AGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCG 83518 || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct 2553745 AGGTCGTTCATCTGGGTGTAGTCCCGGACCGT----------------GCCACGTTCTCG 2553788 Query 83519 ATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGG 83578 ||||||| ||| |||| | | || | | |||| || || || |||| | || | Sbjct 2553789 ATGAGCAGCACCTTGCCCTGCAGCGAGGCCAGGCTCGTGGGCTCCCCGCCGGCCAGCGTG 2553848 Query 83579 CGTGCTGAGAAGGCGTACACAGA 83601 || || ||||||||||||||||| Sbjct 2553849 CGAGCAGAGAAGGCGTACACAGA 2553871 >seq65 Length=11280912 Score = 149 bits (164), Expect = 8e-31 Identities = 267/393 (68%), Gaps = 33/393 (8%) Strand=Plus/Minus Query 83135 CCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG--CACACTGGAGACCAGG 83192 ||||| ||||||||| ||||||| | || |||| || |||| || ||||||| Sbjct 8499455 CCCACTGGGAACTTCTCTGAGTTCCAAGTGTTGTTGTTGTGGGGCACATGGGCGACCAGG 8499396 Query 83193 CAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCT 83252 | |||| ||||||| || ||| | | | ||| || || || | |||||||| Sbjct 8499395 TGCTAAGCTCGGGGTCGGTCGTGAGAGCAGTGGCATTGTCACTGGGTGCTGTCAGGGCCT 8499336 Query 83253 CTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGA 83312 | || |||||||| ||||| || |||||| | ||||| || |||| ||||| ||| || | Sbjct 8499335 CCCGGAGGAAGGCAAAGAGGGG-TGTGCCTTCGCACCATTCACCTTGCACTGCTCCAACA 8499277 Query 83313 GCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCT 83372 | |||| |||| || ||||| || |||| Sbjct 8499276 GGGAGAAGTGGGGCTTGA---------------------------GGGAATTCAGAATCT 8499244 Query 83373 CGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCA 83432 | | || ||||| || ||||| || || ||||||| |||||||| || |||| |||| Sbjct 8499243 CTTCGTTTTGGGCATTCTCCTGATGCCCAAACTGGTAGCACGGGAAACCTAGCATGACCA 8499184 Query 83433 GCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGC 83492 | ||| | || ||||||| |||||| ||||||||||| ||||| ||| |||||||| Sbjct 8499183 GGCCCTGGTGGCCAAGGCGCCACTGCAGATCGTTCATCTGGGTGTAGTCCGGGACCGTGG 8499124 Query 83493 TACCTCAGAGGGACGCTACGTTCTCGATGAGCA 83525 | || | || ||| | | |||||||||||||| Sbjct 8499123 TGCCGC--AGTGACTCCA-GTTCTCGATGAGCA 8499094 >seq74 Length=9548178 Score = 98.7 bits (108), Expect = 1e-15 Identities = 103/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 83347 GACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG-GGCGTTTTCCTGGTGACCGAACT 83405 ||||||||| |||||| || || || | || | ||| || ||||| || || |||| Sbjct 6164403 GACGTGCTTGAGGGAATTCAGAATTTCTTCGTTTTTTGGCATTCTCCTGATGCCCAAACT 6164462 Query 83406 GGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGT 83465 ||| |||||||| ||||||| ||||| ||||| | || |||| ||||||||| |||| Sbjct 6164463 GGTGGCACGGGAAACCAAGCAGGACCAGGCCCCGGGG-CCAAGGCACCGCTGCAGATCGT 6164521 Query 83466 TCATCTGAGTGTA 83478 ||||||| ||||| Sbjct 6164522 TCATCTGGGTGTA 6164534 >seq5 Length=88520344 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/151 (73%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| || ||||| || || || ||||| | || | | || Sbjct 47425798 CCTGATGTCCAAACTGGTTGCAGGGGAAGCCGAGGACCACCAGGCGCCTGGGA---AAGC 47425854 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 | | |||||||||||| | ||| ||||| |||||| ||| | |||||||| || || | Sbjct 47425855 GGCACTGCAGCTCGTTGAGCTGGGTGTAGTCCCGGGTGGTGGTGCCTCAGAGCGAGGCCA 47425914 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 | ||||| || |||| ||||||| || || Sbjct 47425915 CATTCTCTATCAGCACCGCCCGGCCTCGGAA 47425945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608732861116080