Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq21 150 1e-31 seq4 147 2e-30 >seq21 Length=45764842 Score = 150 bits (166), Expect = 1e-31 Identities = 482/738 (65%), Gaps = 20/738 (3%) Strand=Plus/Minus Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957 || |||||||| |||||| || | |||| |||||| || ||| | | ||| Sbjct 37392470 TAGACAGCCATTTCCATTTTAATAGTTGGGTGAGGGTTGTATCCTTCAATCTGGAAGTCT 37392411 Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTG-TTGGGAAAG- 97015 | ||||| || |||||||| | ||| ||||| | || | | | | | ||||||||| Sbjct 37392410 TCAGCTTTGAAGTCATCAATGGTCTCAA-CTTTCCG-CAGAATATTGAGCTTGGGAAAGT 37392353 Query 97016 GCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAG 97075 | || || |||| ||||| || | || | |||| ||||||| ||||| || | Sbjct 37392352 GTCTTGGTTCTCGCTGGAGCTGAACTTTCAGGGGTTCAACATGATTCAGGTAAATATGCG 37392293 Query 97076 CATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATAC 97135 ||||| | || || || | ||| || || || | | |||| || |||||||| Sbjct 37392292 CATCTTCCAATGTATGTACAAAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATTG 37392233 Query 97136 AAGTTAATAGAGAA-TAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGAT 97194 || | | || ||||| || ||||| ||||||||||| || ||||| ||| |||| Sbjct 37392232 TAGGTGAGCAAGGTGTAGCTGGCGATGTTGAAAGGCACCCCCAGGCCCATGTCACCTGAC 37392173 Query 97195 CTTTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAATACATG 97253 || || || | ||| ||||| |||| |||| ||| |||||| ||||| | | | || Sbjct 37392172 CTCTGGTACAGCTGTCAGGACAGCTCACCATTCAC-CACATAGAACTGGCAGAGGGCGTG 37392114 Query 97254 ACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCT 97313 || || |||| | |||| | |||| ||| ||| ||||||||||| | | ||| Sbjct 37392113 GCAAGGAGGCAGCACCATCTGAGGAAGGTCTCTTGGATTGCAAGCACACATGATGA-TCT 37392055 Query 97314 TCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTC 97373 |||| ||||| || | || || | | | | || | || || | || |||| Sbjct 37392054 GTCATCG---GGGTTGGTTTTGATTGTGTCAGTAACCTTTTGTAGCTGGTGTACTCCTTG 37391998 Query 97374 TCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCC 97433 || |||| || | | ||| |||||| || || ||||| ||||| || || || Sbjct 37391997 GCCTGAGTAATCTGAATTCATATCTTTATATTCAGCCCCGAAATGTCTCCACTGAAAGCC 37391938 Query 97434 ATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGA 97493 ||| || || || | |||||| |||||| |||| | | || || Sbjct 37391937 ATAGACTGGGCCTAAATCTCCTCCTTCTCGGGTCGAGAACC---------CCAAGAAGTC 37391887 Query 97494 CCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGT 97553 | || ||||| ||| |||| || | ||| || | | || ||||| | || Sbjct 37391886 TCGGGACCCATTGGCACCCCAGATCTTCACTCCCTTGGAGGAGAGTTCTTTAGCATTGGT 37391827 Query 97554 AGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGT 97613 ||||| |||||||||||| ||| || |||| |||||| |||| || || | ||| || Sbjct 37391826 GGATCCCTTGATAAACCACAGCAACTCCTCCAGAACACCCTTCCAGAACACACGCTTGGT 37391767 Query 97614 TGTTAAGAGAGGAAAATC 97631 ||| | ||||| || || Sbjct 37391766 TGTCAGCAGAGGGAATTC 37391749 >seq4 Length=91125384 Score = 147 bits (162), Expect = 2e-30 Identities = 460/706 (65%), Gaps = 6/706 (1%) Strand=Plus/Plus Query 96961 GCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTG 97020 ||||| ||||||||||||| ||| |||| | || || || | |||||||| || Sbjct 20112665 GCTTTGAAATCATCAATAGTCTCAACTTTTCAG--AATGTTGAGCTTGGGGAAAGGTCTT 20112722 Query 97021 GGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCT 97080 || |||| ||||| || | || | |||| |||||||| ||||| || |||||| Sbjct 20112723 GGTTCTCGCTGGAGCTGAACTTTCAGGGGTTCAACGTGATTCAGGTAAATATGTGCATCT 20112782 Query 97081 CCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTT 97140 || || || || | ||| || || || | | || | || | ||||||| | || Sbjct 20112783 CCCAACGTATGTAAAAAGTCACCTGGTTTCAGGACTGTTATGTGTGTGATCATATAGGTG 20112842 Query 97141 AATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGA 97200 | | | ||||| || ||||| ||||||||||| || ||||| ||| |||| || | Sbjct 20112843 AGCAAGGCGTAGCTGGCGATGTTGAAAGGCACCCCCAGACCCATGTCACCTGACCTCTAG 20112902 Query 97201 TATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGACAGGGG 97260 || | ||| ||||| |||| | | || | ||||| | | | | || || Sbjct 20112903 TACAGCTGGCAGGACAGCTCGCTGTTTACCATGCAGAACTGGCAGAGGGCGAGGCAAGGA 20112962 Query 97261 GGCAACGCCATTTTTGGAACATCT-AAGACATTCCAAGCACACATCAACATTCTTCTATC 97319 |||| | |||| | |||| ||| ||| ||||||||||||| | | ||||||| || Sbjct 20112963 GGCAGCACCATCTGAGGAAGGTCTCTAGA-ATTCCAAGCACACCTGATGGTTCTTCTGTC 20113021 Query 97320 GGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACC 97379 ||||| || | || || | | | | || | | || || || |||| || Sbjct 20113022 ATCAGGGTTGGTTTTGATTGTGTCAGTGACCTTTTGCAGCTGGTCTACTCCTTGACCTGA 20113081 Query 97380 ATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAAC 97439 |||| || | | ||| |||||| | |||| ||| ||| || || ||||| || Sbjct 20113082 GTAATCTGAATTCATATCTTTATATTCAGTCCCAACATGGCTCTGCTGAAAGCCATAGAC 20113141 Query 97440 AGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGA 97499 || || | ||||||||||||| |||||| || || ||| | || | || Sbjct 20113142 TGGGCCTAAATCTCCTTCTTCTCCGGTACAGAACCCCAGGCCCTCTGAGAAGTCTCGTGA 20113201 Query 97500 TCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTT-GCTGTCAGTAGATC 97558 || || |||||||| | | | | || | | || ||||| ||| | | |||| Sbjct 20113202 CCCCTTGGCATCCCAGAGCTTCCCTCCCTTGGAGGAGAGTTCTTTAGCT-TTGTTGGATC 20113260 Query 97559 CTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTA 97618 | |||||||||||| | | || |||| |||||| |||| || || ||| ||||| | Sbjct 20113261 CCGTGATAAACCACAGCGACTCCTCCAGAACACCCTTCCAGAACACATGCTTGGTTGTCA 20113320 Query 97619 AGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAA 97664 ||||| || || | | |||||||| | | || ||| ||||| Sbjct 20113321 GTAGAGGGAATTCATCTCTCAAGCTGTAGCACGCCTACATGCCAAA 20113366 Score = 120 bits (132), Expect = 2e-22 Identities = 460/713 (65%), Gaps = 11/713 (2%) Strand=Plus/Plus Query 96961 GCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTG 97020 ||||| ||||||||||| | ||| |||| || || | | |||||||| || Sbjct 20153532 GCTTTGAAATCATCAATGGTCTCAACTTTTCACAGAATGTTGACCTTGGGGAAAGGTCTT 20153591 Query 97021 GGAGTTCGCGTAAGCTG--CTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCAT 97078 || |||| ||||| || | | || | |||| ||||| ||||| || |||| Sbjct 20153592 GGTTCTCGCTGGAGCTGAACTTTCTCAGGGGTTCAAC---ATTCAGGTAAATATGTGCAT 20153648 Query 97079 CTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAG 97138 |||| || || || | ||| || || || | | || | || |||||||| | | Sbjct 20153649 CTCCCAACGTATGTAAAAAGTCACCCGGCTTCAGGACTGTTATGTGTGCGATCATGTAGG 20153708 Query 97139 TTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTT 97198 | | | | ||||| || ||||| ||||||||| | || ||||| ||| |||| || | Sbjct 20153709 TGAGCAAGGCGTAGCTGGCGATGTTGAAAGGCACCGCCAGACCCATGTCACCTGACCTCT 20153768 Query 97199 GATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAATACATGACAG 97257 | || | ||| ||||| |||| | | ||| ||| | ||||| | | | | || Sbjct 20153769 GGTACAGCTGGCAGGACAGCTCGCTGTTCAC-CACGCAGAACTGGCAGAGGGCGAGGCAA 20153827 Query 97258 GGGGGCAACGCCATTTTTGGAACATCTA-AGACATTCCAAGCACACATCAACATTCTTCT 97316 || |||| | |||| | |||| ||| ||| ||||||||||||| | | ||||||| Sbjct 20153828 GGAGGCAGCACCATCTGAGGAAGGTCTCTAGA-ATTCCAAGCACACCTGATGGTTCTTCT 20153886 Query 97317 ATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCC 97376 || ||||| || | || || | | | | || | | | || | |||| || Sbjct 20153887 GTCATCAGGGTTGGTTTTGATTGTGTCAGTGACCTTTTGCAGCAGGTCTGCACCTTGACC 20153946 Query 97377 ACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATA 97436 |||| || | | ||| |||||| || |||| ||| ||||| || || ||||| Sbjct 20153947 TGAGTAATCAGAATTCATATCTTTATATTCAGCCCCAACATGGCTCCACTGAAAGCCATA 20154006 Query 97437 AACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCT 97496 || || || | ||||||||||||| |||||| || || || || || | Sbjct 20154007 GACTGGGCCTAAATCTCCTTCTTCTCAGGTACAGAACCCCAGGCCCTCCAAGAAGTCTCG 20154066 Query 97497 AGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTT-GCTGTCAGTAG 97555 || || || |||||||| | | | | || | | || ||||| ||| | || | Sbjct 20154067 TGACCCCTTGGCATCCCAGAGCTTCCCTCCCTTGGAGGAGAGTTCTTTAGCT-TTGGTGG 20154125 Query 97556 ATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTG 97615 |||| |||||||||||| | | || |||| | |||| |||| || || | ||| | || Sbjct 20154126 ATCCCGTGATAAACCACAGCGACTCCTCCAGAGCACCCTTCCAGAACACACGCTTGGCTG 20154185 Query 97616 TTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAACA 97668 | | ||| | | || | |||||||| | | ||| || ||||| ||| Sbjct 20154186 TCAGCAGAAGGACTTCATCACTCAAGCTGTAACACGCCTGTATGCCAAACACA 20154238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346748489535140