Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq8 140 3e-28 seq5 136 3e-27 seq1 123 2e-23 seq32 116 3e-21 seq4 116 3e-21 seq124 109 5e-19 seq26 98.7 9e-16 seq93 96.9 3e-15 seq83 86.0 5e-12 >seq8 Length=79101790 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || |||||||| || |||||||| || Sbjct 4905328 TACCACCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCA 4905387 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| |||||| |||||||| ||||| | || ||||||||||| || || | Sbjct 4905388 AGAGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGG 4905447 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||||||| ||||| ||| || | || | |||||| || ||| | Sbjct 4905448 GAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAA 4905507 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | ||| | || ||| | ||||| || || ||||| ||||||||| Sbjct 4905508 CCTCAAGGGTGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCATG 4905557 >seq5 Length=88520344 Score = 136 bits (150), Expect = 3e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || | |||||| || |||||||| || Sbjct 40362605 TACCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCG 40362664 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| |||||| |||||||| ||||| | || ||||||||||| || || | Sbjct 40362665 AGAGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGG 40362724 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||||||| ||||| ||| || | |||| |||||| || ||| | Sbjct 40362725 GAATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCGCTG-GCTCCA 40362783 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | ||| | || ||||| ||||| || || ||||| || |||||| Sbjct 40362784 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCATG 40362833 Score = 131 bits (144), Expect = 1e-25 Identities = 158/214 (74%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGA-ATGTTGTAATCGCTCATAGTGCGCGTAT 118584 || ||||||||| | || |||||||| || |||||||| || | ||||| || Sbjct 1010645 CAGCACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTGCAGCCAT 1010704 Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 |||| |||||||| ||||| | || ||| ||||||| || || || ||||||||||||| Sbjct 1010705 CCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCCTCCTTGT 1010764 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 || ||||| ||| || | |||| |||||| || ||| ||||| | ||| | | Sbjct 1010765 CTTGGATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGG 1010824 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| ||||| || || ||||| |||||||| Sbjct 1010825 TCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq1 Length=111700974 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || ||||||| | || |||||||||| Sbjct 26898451 TACCACCACGCAGACGCAGCACCAAGTGCAGGGTCGACTCTTCTGGA-TGTTGTAATCCG 26898509 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| |||||| |||||||| ||||| | || ||||||||||| | ||| | Sbjct 26898510 --AGAGTGCGGCCATCCTCCAGCTGTTTCCCAGCAAAAATCAGACGCTGCTGGTTGGG-G 26898566 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||||||| ||||| ||| || | |||| |||||| || ||| Sbjct 26898567 GAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCC 26898626 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || ||||| | ||| || || ||||| || ||||| Sbjct 26898627 CCTCAAGGGTGATGGTCTTGCCTGCCAGGGTCTTCACAAAGATGTGCAT 26898675 >seq32 Length=28911305 Score = 116 bits (128), Expect = 3e-21 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || |||||||| || |||||||| || Sbjct 25037347 TACCACCACGCAGACACAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCG 25037288 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCG---- 118625 | |||||| |||||| ||||| || ||||| | || ||||||||||| | | Sbjct 25037287 AGAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAGAAATCAGACGCTGCTGGTGGGGGG 25037228 Query 118626 -GGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684 || || ||||||||||||||| ||||| ||| || |||| |||||| || Sbjct 25037227 AGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACAGTCTCGATGGTGTCGCTG-G 25037169 Query 118685 CTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||| | ||| || || ||||| ||||| || || ||| | |||||||| Sbjct 25037168 CTCAGCCTCAAGGGTGACGGTCTTGCCTGTCAGGGTCTTCACAGAGATCTGCAT 25037115 >seq4 Length=91125384 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || |||||||| || |||||||| || | |||||| ||| Sbjct 27213454 CAGCACCAAGTGCAG-GTGGACTCTTTCTGGATGTTGTAGTCCG--AGAGTGCGGCCATC 27213510 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||||||| ||||| | || |||| |||||| || ||| | |||||||||||||| Sbjct 27213511 CTCCAGCTGTTTACCAGCAAAAATCAGACACTGCTGGTCTGGAAGAATGCCCTCCTTGTC 27213570 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| ||| || | |||| | ||| || ||| |||| | ||| || || Sbjct 27213571 TCGGATTTTAGCTTTGACATTCTCGATGCTGTTGCTGGGCTCAGCCTCAAGGGTGACGGT 27213630 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||| | || || ||||| | |||||| Sbjct 27213631 CTTGCCCGTCTGGGTCTTCACAAAGACCTGCAT 27213663 >seq124 Length=2835626 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || |||||||| || |||||||| | | ||||| ||| Sbjct 1071994 CAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTGCGAGACAGTGCTGCCATC 1071935 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||||||| ||||| | | ||||||| ||| || || || |||||||||||||| Sbjct 1071934 CTCCAGCTGTTTACCAGCAAAAACCAGACGCTTCTGGTCCGGGGGAATGCCCTCCTTGTC 1071875 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||| ||| || | || | ||||||| || ||| ||||| | || | || Sbjct 1071874 TTGGGTTTTGGTTTTGACATTCTCCATGGTGTCCCTGGGCTCCACCTCAAGGGCGATGGT 1071815 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | |||| || || ||||| |||||||| Sbjct 1071814 CTTGTCCATCAGGGTCTTCACAAACATCTGCAT 1071782 >seq26 Length=39178583 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || ||| |||| || |||||||| || | |||| | ||| Sbjct 13898603 CAGCACCAAGTGCAG-GTGGACCCTTTCTGGATGTTGTAGTCCAAGAGAGTGTGGCCATC 13898545 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | |||||| ||||| | || ||| ||||||| || || || |||||||||||||| Sbjct 13898544 CTCCAACTGTTTACCAGCAAAAATCAGAGGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 13898485 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| ||| || | || |||||| || ||| |||| | ||| | || Sbjct 13898484 TTGGATTTTAGCTTTCACATTCTCAGTGGTGTCGCTGGGCTCAGCCTCAAGGGTGATGGT 13898425 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| | || || || |||||||| Sbjct 13898424 CTTGCCTGTCAGGGGCTTCAC-AAGATCTGCAT 13898393 >seq93 Length=6471344 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || | ||||| || |||||||| || | |||||| ||| Sbjct 5958111 CAGCACCAAGTGCAG-GTGGGATCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATC 5958053 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 | | |||||||| ||||| | | ||||||||||| || || || |||||||||||||| Sbjct 5958052 CACCAGCTGTTTGCCAGCAAAAGTCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 5957993 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| || || | |||| |||||| | ||| ||| | ||| || Sbjct 5957992 TTGGATTTTAACCTTGACTTTCTCGATGGTGTCACGGGGCTCACTCTCAAGGGTAGTGGT 5957933 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||| || || ||||| |||||||| Sbjct 5957932 CTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 5957900 >seq83 Length=8071411 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || | |||||| || |||||||| || Sbjct 6415560 TACCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCG 6415501 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||| |||||||| ||||| | || ||| ||||||| | ||| Sbjct 6415500 --AGGGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTGGGG-- 6415445 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||||||| ||| | ||| || | |||| |||| || | | | Sbjct 6415444 GAATGCCCTCCTTGTCTTGGATTCTGGCTTTGACATTCTCGA-TATGTCGCTGGGCCCCA 6415386 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| |||| | || ||||| ||||| | || || || |||||||| Sbjct 6415385 CCTC-ACGGGCGAGGTCTTGCCCGTCAGGGACTTCAC-AAGATCTGCAT 6415339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433785976038184