Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1 100 5e-16 >seq1 Length=111700974 Score = 100 bits (110), Expect = 5e-16 Identities = 104/133 (78%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 ||||||||||| |||||||| ||||| |||||||| || || |||||| | || ||||| Sbjct 81653306 GCATTTTTTGGCGCTCAGCTGAATTCCTTTATCCACGTGATCATGTACTCGTACTATGGG 81653365 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 || | || | ||| || ||| ||||| ||||| || ||||||||||| || || || | Sbjct 81653366 TTGACTGCATTTGG-CCCATGGATTCAG-AAGTACCTCTGGTGGAAACGGTACCTGACCA 81653423 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 81653424 TGCTGCAGCTGGT 81653436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923099841256080