Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq8 107 1e-18 seq5 107 1e-18 seq11 95.1 8e-15 seq1 89.7 3e-13 seq39 86.0 4e-12 seq32 86.0 4e-12 seq10 86.0 4e-12 seq16 84.2 1e-11 >seq8 Length=79101790 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| ||| | || |||||||| ||||||||||| | Sbjct 4905330 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCAAG 4905389 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| || || || ||||| || ||||||||||| ||| Sbjct 4905390 AGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 4905449 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || ||| ||||| | || | || | ||| | | || || Sbjct 4905450 ATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 4905508 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||| | || || || ||||||||||||||||| Sbjct 4905509 CTCAAGGGTGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCAT 4905556 >seq5 Length=88520344 Score = 107 bits (118), Expect = 1e-18 Identities = 163/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| ||| | || |||||||| ||||||||||| || Sbjct 40362607 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAG 40362666 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| || || || ||||| || ||||||||||| ||| Sbjct 40362667 AGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 40362726 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || ||| ||||| | || | || | ||| | | || || Sbjct 40362727 ATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCGATGGTGTCGCT-GGCTCCAC 40362784 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || || || ||||||||||| ||||| Sbjct 40362785 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCAT 40362832 Score = 102 bits (112), Expect = 5e-17 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 34170 GCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGT-ATGTTGTAGTCGGACAGCTGA 34228 |||| | |||||||| ||| | || ||||||||| ||||||||||| || || Sbjct 1010638 GCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTG 1010697 Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTC 34288 | | | || |||| ||| || || || ||||| || |||||||||| ||| | || | Sbjct 1010698 CAGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCC 1010757 Query 34289 TCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCAC 34347 |||||||| || ||| ||||| | || | || | ||| | | || || || | Sbjct 1010758 TCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCAAG 1010816 Query 34348 CGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| ||||| || || || ||||||||||||||||| Sbjct 1010817 GGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq11 Length=65385231 Score = 95.1 bits (104), Expect = 8e-15 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 34152 TTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGT 34211 |||| ||| | || || || || || ||||| || || | ||| | ||||| | | Sbjct 25275732 TTTCTTCGCA-CCACCTCGAAGTCTGAGCACAAGATG-AGAGTGGACGCCTTCTGAACGC 25275675 Query 34212 TGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGC 34270 ||||||| |||| | || || | || |||| ||||||||| || || || ||||| ||| Sbjct 25275674 TGTAGTCAGACAAGGTG-CGTCCCTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGC 25275616 Query 34271 TGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCG 34330 || || |||| | ||||||||| ||||| ||| | ||| |||||| ||| Sbjct 25275615 TGATCAGGAGGCATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTCTATCGTATCT 25275556 Query 34331 GTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | | ||||| || | | ||||| | || ||||| || |||||||||||||||||| Sbjct 25275555 GAGGGGTCGACCTCGAGAGGGATGGGCCTCCCCGTGAGGGTCTTCACAAAGATCTGCATC 25275496 >seq1 Length=111700974 Score = 89.7 bits (98), Expect = 3e-13 Identities = 162/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| ||| | || |||| ||| |||||||| || || Sbjct 26898453 CCACCACGCAGACGCAGCACCAAGTGCAGGGTCGACTCTT-CTGGATGTTGTAATCCGAG 26898511 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || ||| | || |||| ||| || || || ||||| || |||||||||| | ||| Sbjct 26898512 AG-TG-CGGCCATCCTCCAGCTGTTTCCCAGCAAAAATCAGACGCTGCTGGTTGG-GGGA 26898568 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || ||| ||||| | || | || | ||| | | || | Sbjct 26898569 ATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCCC 26898627 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| | || || ||||||||||| |||||| Sbjct 26898628 CTCAAGGGTGATGGTCTTGCCTGCCAGGGTCTTCACAAAGATGTGCATC 26898676 >seq39 Length=19053451 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/120 (78%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| || || |||||||| ||||||||||| || || || ||| | || Sbjct 10604190 AGGACAAGGTGCAAGGTCGACTCTTTCTGGATGTTGTAGTCAGAGAG-TG-CGGCCATCT 10604133 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC-ACGCTCTCCTTGTC 34296 |||| |||||||||||| || ||||||| ||||||||| | |||| | || |||||| || Sbjct 10604132 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTC-AGGGGCGATGCCCTCCTTCTC 10604074 >seq32 Length=28911305 Score = 86.0 bits (94), Expect = 4e-12 Identities = 163/235 (69%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| ||| | || |||||||| ||||||||||| || Sbjct 25037345 CCACCACGCAGACACAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAG 25037286 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG-----A 34277 || ||| | || |||| |||||| || || |||| || |||||||||| | Sbjct 25037285 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAGAAATCAGACGCTGCTGGTGGGGGGAG 25037226 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT--ATCGAATCGGTCGA 34335 ||| | || ||||||||| || ||| ||||| || | || || | ||| | | Sbjct 25037225 GGGGGATGCCCTCCTTGTCTTGGAT-TTTGGCTTT-GACAGTCTCGATGGTGTCGCT-GG 25037169 Query 34336 TTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || | |||| ||| ||||| || || || |||||| ||||||||||| Sbjct 25037168 CTCAGCCTCAAGGGTGACGGTCTTGCCTGTCAGGGTCTTCACAGAGATCTGCATC 25037114 >seq10 Length=65549256 Score = 86.0 bits (94), Expect = 4e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34209 TGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCT 34268 |||||||||||||||| | | | || |||| ||||||||| || || || ||||| | Sbjct 13233523 TGTTGTAGTCGGACAGGGTATGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTT 13233582 Query 34269 GCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAAT 34328 |||| || || | | ||||||||| ||||| ||| | ||| |||||| || Sbjct 13233583 GCTGATCAGGAGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTCTATCGTAT 13233642 Query 34329 CGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCA 34388 | | | ||||| || | | |||||| || || || || || |||| ||||||||| Sbjct 13233643 CAGAGGGCTCGACCTCGAGAGGGATGGTCTTCCCCGTAAGGGTCTTCATGGAGATCTGCA 13233702 Query 34389 TC 34390 || Sbjct 13233703 TC 13233704 >seq16 Length=57704787 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||||||| | || ||||||||| |||||||||| ||| | ||| | || ||| Sbjct 36557376 ACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTTAGACTGGGTGCGGCCATCTTCC 36557435 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | ||| || || || || || |||| ||||||||| || | || |||||||| Sbjct 36557436 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 36557495 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 |||||| | | | || | || | | | | || || || | |||||||| || Sbjct 36557496 ATCTTTGCCCTGATATTCTCAATGGTGGCCCTGGGCTCCACCTCAAGGGTGATGGTCTTA 36557555 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | ||||||||||||||||||||| Sbjct 36557556 CCAGTTACAGTTTTCACAAAGATCTGCAT 36557584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323038917629120