Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq38 1361 0.0 seq79 113 3e-20 seq62 84.2 2e-11 >seq38 Length=20508454 Score = 1361 bits (1508), Expect = 0.0 Identities = 1216/1521 (80%), Gaps = 21/1521 (1%) Strand=Plus/Plus Query 107136 AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATC---TATCTTTA 107192 |||| | |||| || || ||||| |||||||||| | || ||| || | | ||| Sbjct 17860158 AGGGCCCTAGGTGGGTATTTACTGAAGATATTTGTCCAGAGGAGAAATACTTTTTTTTTG 17860217 Query 107193 CCATCACTCTGGAGTTGAACTTGATGTTC---------TGG----ATTAGTTTGTAATTA 107239 | || | | ||||||||| |||||||||| ||| ||| |||||||| | Sbjct 17860218 CTATTAGTTTGGAGTTGAGCTTGATGTTCCTATGAGCGTGGTCAGATTTGTTTGTAACTG 17860277 Query 107240 AAGGCATTTTGTTCTGTCCAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAACTCT 107296 || |||||||||||||||||||| || ||| || |||| |||||||| | |||| Sbjct 17860278 AAAACATTTTGTTCTGTCCAAGGACGCCGTCTTCCCCCTCCTTTCCTGTGCCTCACCTCT 17860337 Query 107297 -CCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATC 107355 |||| ||| | || |||||||||| | ||||||||| |||| | | || | | Sbjct 17860338 GCCTGGTCTTC-ATTTCATGAAGATGTCCTGGTGGAAGAGGAAGTTCTCCCTGCAGTCTT 17860396 Query 107356 ATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCA 107415 | ||| ||||||||| || || |||||||| ||| |||| ||||||||||||| ||| Sbjct 17860397 ACCTGGGGGCCCTGGCTTGTTACATGCTGCTAGCCATTGTGGCTCTGAGACTTTCTCTCC 17860456 Query 107416 GGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACT 107475 | || |||||||| | || | |||| |||||||||| |||||| || || || | || Sbjct 17860457 GATTGAAATGTGACTTTGAGCACCTGGACCTGGAGTCCAAGGACTTTCAAAGCCAACGCT 17860516 Query 107476 GTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTG 107535 ||||| ||| ||||||| | |||||||||||||||||| | |||||||||||||||| Sbjct 17860517 GTAGGAACAACTTGTACATGACCCTGAAGCTGCCAGCAAAAAAGTCCATCAACTGTTCTG 17860576 Query 107536 GGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGA 107595 || ||| ||||||| ||||||| ||| | ||| | ||||| || ||||| | | | Sbjct 17860577 GGGTCATTAGAGGGGATGAGGAAGCCGTGATTCAGTCTCTCCTGGAAAACCTAGCAAGCA 17860636 Query 107596 AGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGC 107655 ||||||| || |||| |||| | | | | ||||||||| | ||| ||||||||| Sbjct 17860637 AGAAAAACAGGAAGCCTTTCACCGACGCGGACTACCTCAACCTGACCCACAACTGTGAGC 17860696 Query 107656 GCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCC 107715 ||| ||| |||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct 17860697 ACTTTAAGACCCAGAGGAAGTTTATAGAGTTCCCACTGAGCAAAGAAGAGTTAGACTTCC 17860756 Query 107716 CCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAG 107775 ||||||||||||| |||||||||||||||||||||||||| |||||| | |||||| ||| Sbjct 17860757 CCATTGCCTACTCCATGGTGGTCCATGAGAAGATTGAAAATTTTGAAAGACTGCTGAGAG 17860816 Query 107776 CCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTT 107835 | ||||||||||| |||||||||||||| ||||||||||||| ||||||||||| | | Sbjct 17860817 CTGTGTATGCCCCCCAGAACATATACTGCGTCCACGTGGATGAAAAGTCCCCAGAACCAT 17860876 Query 107836 TCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGT 107895 ||||| ||| ||||||| ||| | | |||||||| |||||||||||||||||||| Sbjct 17860877 TCAAAACGGCCATCAAGGCGATTGTCGCATGCTTCCCAAATGTCTTCATGGCCAGTAAAC 17860936 Query 107896 TGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAG 107955 |||| || |||||||||||||| |||||||| ||||| || ||| ||||||| ||||||| Sbjct 17860937 TGGTTCCAGTGGTTTATGCCTCGTGGTCCAGGGTGCAGGCAGACTTGAACTGCATGGAAG 17860996 Query 107956 ACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCC 108015 |||||||||||||| | ||||||||||| ||||| ||||| ||||| ||||||||||| | Sbjct 17860997 ACTTGCTCCAGAGCCCGGTGCCATGGAAATACTTCCTGAACACATGTGGGACAGACTTTC 17861056 Query 108016 CCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTA 108075 ||||||||||||||||||||||||||| ||| |||||| ||||||| || |||| || || Sbjct 17861057 CCATAAAGACCAATGCCGAGATGGTCCAGGCTCTCAAGGTGTTGAATGGGAAGAGCAATA 17861116 Query 108076 TGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGA 108135 ||||||| ||| | ||| | |||| ||||||| |||||| |||| | ||||||| ||| Sbjct 17861117 TGGAGTCAGAGATGCCTACGGAGTACAAAAAATCCCGCTGGCAATATCACTATGAGATGA 17861176 Query 108136 CAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGT 108195 ||||||| ||| | |||||||||||||| |||||||| || | ||||| || ||| Sbjct 17861177 CAGACACGCTGCGCAAGACCAGCAAGATGAAAGACCCTCCGCCCGGCAATTTGCCTGTGT 17861236 Query 108196 TCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACC 108255 ||||||||||||||||| | ||||| || |||| || ||||| ||||| ||||| |||| Sbjct 17861237 TCACAGGGAATGCCTATATCGTGGCTTCGCGAGATTTCGTCCAGCATGTTTTAGAGAACC 17861296 Query 108256 CTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCT 108315 | ||||||||| |||| |||| ||||| ||||||||||| |||||||| || ||||||| Sbjct 17861297 CCAAATCCCAACAACTGATTGAGTGGGTAAAAGACACCTACAGCCCCGATGAGCACCTCT 17861356 Query 108316 GGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATC 108375 |||| ||||||||||| || ||||||||||||||||||||||| |||| |||||||| Sbjct 17861357 GGGCTACCCTTCAGCGAGCACCGTGGATGCCTGGCTCTGTTCCCTACCACACCAAGTATG 17861416 Query 108376 ACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATG 108435 || |||| ||| || ||||||| ||||| || |||||||||||| | ||||| ||||| Sbjct 17861417 ACGTCTCGGACTTGGCTGCCATTGCCAGACTGGTCAAGTGGCAGAATCACGAAGGAGACA 17861476 Query 108436 TCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTT 108495 | || |||||||||||| |||| ||| |||||||||| | | ||| ||||| |||| Sbjct 17861477 TGAGACAGGGGGCGCCTTACCCACCTTGCACTGGAATCCACCAGCGGGGTATCTGTATTT 17861536 Query 108496 ACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTG 108555 | ||| | |||||||| | ||||| || |||| ||||||||| |||| |||||||||| Sbjct 17861537 ATGGGTCTGGGGACCTACATTGGATGCTACAGACCCATCACCTGCTGGCCAACAAGTTTG 17861596 Query 108556 ACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCA 108615 | || |||||||| || | ||| |||||||||||||||||||| || |||||||||| Sbjct 17861597 ATCCAGCCGTGGATGACAATGCCCTCCAGTGCTTAGAAGAGTACCTGCGCCATAAGGCCA 17861656 Query 108616 TCTATGGGACTGAACTTTGAG 108636 |||||||||||||||| |||| Sbjct 17861657 TCTATGGGACTGAACTCTGAG 17861677 >seq79 Length=8777348 Score = 113 bits (124), Expect = 3e-20 Identities = 557/875 (64%), Gaps = 15/875 (2%) Strand=Plus/Plus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 ||||| | |||||| | ||| || |||||||| || || ||||| || | ||||| Sbjct 7085340 CTGAGCCAGGAAGAGGCCGCCTTTCCAATTGCCTATTCCATCGTGGTTCACCACAAGATC 7085399 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 || | || || |||||||| | ||| | || | || ||||| | ||||| || ||| Sbjct 7085400 GAGATGTTCGACAGGCTGCTGAGGGCCATCTACACGCCGCAGAATGTCTACTGCGTTCAC 7085459 Query 107811 GTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTC 107870 ||||| || ||| ||| | ||| | || || || ||| || || ||| Sbjct 7085460 GTGGACCGAAAATCCGAGGAGTCCTTCTTGGCTGCTGTGTCGGGCATCGCATCGTGTTTC 7085519 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 || |||||| ||||||| ||| ||| ||||| ||||| |||||| | | ||| Sbjct 7085520 GGTAACGTCTTCGTGGCCAGCAAGCTGGAGAACGTGGTGTATGCTTCCTGGAGCCGGGTG 7085579 Query 107931 CAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGTACT 107988 || || ||||| ||||| ||| | ||| || || | |||| |||||||||| Sbjct 7085580 CAGGCCGACCTCAACTGCATGAAGGACCTGTATGGGA--TGGGTGCAGACTGGAAGTACT 7085637 Query 107989 TACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCC 108048 | | || ||||| | || ||||| || || ||||| ||||| |||| | | Sbjct 7085638 TGATAAACCTGTGCGGCATGGATTTCCCTATTAAAACCAACCTGGAGATTGTCCAGAAGC 7085697 Query 108049 TCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaa 108108 ||| | || ||| ||||||| ||||| | ||| | | | | | | | ||| | Sbjct 7085698 TCAGGTCCTTACGGGGGCAGAACAGCCTGGAGACGGAGCC-CATGCCG-GCCAATAAAGA 7085755 Query 108109 --aTCGCTGGAAATACCGCTATGAGGTGACAGAC---ACACTGTACCCTACCAG-CAAGA 108162 | | ||||| | | || || || || || || ||| | | || Sbjct 7085756 GGAAAGGTGGAAGAAGCATTACGAAGTCGTGGATGGGACGCTCACAAAGACCGGGCTCGA 7085815 Query 108163 TGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCT 108222 ||| || || ||| || ||||||||| | || | || |||||||||| Sbjct 7085816 CAAAGC-CCGGCCTCCTCTCAAAACACCCATGTTTTCCGGCAGCGCGTATTTTGTGGTGC 7085874 Query 108223 CTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAA-ATCCCAAAGACTGGTTGAATGG 108281 | | || ||| | || |||| || || ||| |||| | | || ||| Sbjct 7085875 GCAGGGACTATGTGGGTTACGTGCTAGAAAATGAAAACATCAGAAAGTTTA-TGGAGTGG 7085933 Query 108282 GTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGG 108341 | |||||||||| ||||| || || | |||||||||||| ||||| | | || Sbjct 7085934 GCGCAAGACACCTACAGCCCTGATGAGTATCTCTGGGCCACCGTTCAGAGGATTTCGGAC 7085993 Query 108342 ATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCC 108401 | || ||| | | || ||| || ||| |||| || |||||| ||||||||| Sbjct 7085994 GTCCCGGGCGCACTGCCCTCGAACCGTAAATATGACATGTCTGACATGCACGCCATCGCC 7086053 Query 108402 AGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCC 108461 ||| ||||||||||||| ||| |||||| || || | |||||| || || | ||| Sbjct 7086054 AGGTTCGTCAAGTGGCACTACTTCGAGGGCGACGTTGCCCAGGGGGCTCCCTACCCGCCC 7086113 Query 108462 TGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATT 108521 ||| || |||| | | || | ||| | | ||| || || ||| || ||||||| Sbjct 7086114 TGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTCTTCGGAGCTGGAGACTTGAACTGGATG 7086173 Query 108522 CTCCAGAACCATCACCTCTTGGCAAACAAGTTTGA 108556 | | | || ||| | || || ||||||||||| Sbjct 7086174 TTGCGCCAGCACCACTTGTTTGCCAACAAGTTTGA 7086208 >seq62 Length=11547714 Score = 84.2 bits (92), Expect = 2e-11 Identities = 228/341 (67%), Gaps = 16/341 (5%) Strand=Plus/Plus Query 107696 TAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAA 107755 ||||||||| || || || | |||||| | ||||| |||| | || |||| | Sbjct 8917757 TAAAGAAGAAGCCGAATTTCCTTTGGCCTACGCCATGGTCATCCACCACAATTTTGACAC 8917816 Query 107756 CTTTGAACGGCTGCTGCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTG 107813 ||||| |||| | || || | || |||||| ||||| | ||||| || || || Sbjct 8917817 CTTTGCGAGGCTCTTCCGGGCGATTTACATGCCCC--AGAACGTCTACTGCGTTCATGTA 8917874 Query 107814 GATGTGAAGTCCCCAGA-GACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGCTTCC 107871 |||| |||| || | | || ||| |||||||| || || | |||| | |||||||| Sbjct 8917875 GATGAGAAGGCCACGGCCGAATTT-AAAGAGGCAGTGCAG-CAATTACTGAGCTGCTTCC 8917932 Query 107872 CCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGC 107931 | || | ||| |||| ||| ||| || || || || | |||||| | | Sbjct 8917933 CAAACGCTTTCCTGGCTTCCAAGATGGAACCAGTCGTCTACGGAGGGATCTCCAGACTCC 8917992 Query 107932 AAGCTGACCTGAACTGTATGGAAGACTT----GCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 | |||||||||||||| ||| |||| | || ||||| || || ||||||||| Sbjct 8917993 AGGCTGACCTGAACTGCATGAGAGACCTGGCGGCCGCAGAG----GTTCCCTGGAAGTAC 8918048 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 | | || || || ||| ||| |||||| | || ||||| Sbjct 8918049 GTGATCAACACCTGTGGGCAAGATTTCCCCCTGAAAACCAA 8918089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348233137492548