Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq21 197 1e-45 seq4 183 2e-41 seq34 147 2e-30 >seq21 Length=45764842 Score = 197 bits (218), Expect = 1e-45 Identities = 491/745 (66%), Gaps = 14/745 (2%) Strand=Plus/Plus Query 20031 CTTGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGA 20090 ||||| ||||||| || | | || || || || || || ||||| || ||| | || Sbjct 37391739 CTTGACTGATGAATTCCCTCTGCTGACAACCAAGCGTGTGTTCTGGAAGGGTGTTCTGGA 37391798 Query 20091 AGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGT 20150 ||||| | |||||||| || ||||| || ||| ||| || || || ||||| Sbjct 37391799 GGAGTTGCTGTGGTTTATCAAGGGATCCACCAATGCTAAAGAACTCTCCTCCAAGGGAGT 37391858 Query 20151 TAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCG 20210 ||||| ||| | || |||| || | || || || || | ||| Sbjct 37391859 GAAGATCTGGGGTGCCAATGGGTCCCGAGACTTCTTG---------GGGTTCTCGACCCG 37391909 Query 20211 TCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA 20270 ||| || ||||| || || || ||||| ||||| ||||||||||| || |||||||| Sbjct 37391910 AGAAGGAGGAGATTTAGGCCCAGTCTATGGCTTTCAGTGGAGACATTTCGGGGCTGAATA 37391969 Query 20271 TGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAA 20330 | || ||||| || |||| | || ||||||||| | || ||||||| |||| | | Sbjct 37391970 TAAAGATATGAATTCAGATTACTCAGGCCAAGGAGTACACCAGCTACAAAAGGTTACTGA 37392029 Query 20331 TTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGA 20390 ||| ||||| ||||| | ||||| || || | || || || || | | ||| Sbjct 37392030 CACAATCAAAACCAACCCCGATGACAG----ATCATCATGTGTGCTTGCAATCCAAGAGA 37392085 Query 20391 TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAA 20450 | ||| |||| ||||||| || || || ||||| || || || | ||| Sbjct 37392086 CCTTCCTCAGATGGTGCTGCCTCCTTGCCACGCCCTCTGCCAGTTCTATGTGGTGAATGG 37392145 Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510 ||| |||| || || |||| || | || | ||| ||||| ||||| || |||||||| Sbjct 37392146 TGAGCTGTCCTGACAGCTGTACCAGAGGTCAGGTGACATGGGCCTGGGGGTGCCTTTCAA 37392205 Query 20511 TATTGCAAGTTATGCGCTGCTTACGTA-TATGATTGCACATGTTACAGATTTAAAAACGG 20569 || || || || | |||| || || ||||| ||||| | |||| | || | | Sbjct 37392206 CATCGCCAGCTACACCTTGCTCACCTACAATGATCGCACACATCACAGGCCTGAAGCCAG 37392265 Query 20570 GTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAA 20629 ||||||| || || || | | ||| |||||||||||||| |||||| | ||||| | | Sbjct 37392266 GTGACTTTGTACATACATTGGAAGATGCGCATATTTACCTGAATCATGTTGAACCCCTGA 37392325 Query 20630 AATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTA 20689 || | ||| | ||| |||||| ||| || || | || ||| || | ||| Sbjct 37392326 AAGTTCAGCTCCAGCGAGAACCAAGACACTTTCCCAAGCTCAATATTCTGCGGAAAGTTG 37392385 Query 20690 AAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATT 20749 | ||| | || || |||||||| || || | | ||||| || || || || Sbjct 37392386 AGACCATTGATGACTTCAAAGCTGAAGACTTCCAGATTGAAGGATACAACCCTCACCCAA 37392445 Query 20750 CAATTCCAATGGAAATGTCTGTTTA 20774 | ||| |||||||||| |||| || Sbjct 37392446 CTATTAAAATGGAAATGGCTGTCTA 37392470 >seq4 Length=91125384 Score = 183 bits (202), Expect = 2e-41 Identities = 380/562 (68%), Gaps = 3/562 (1%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || ||||| || || || ||||| ||||| ||| ||| |||| |||||||| Sbjct 20113161 AAGAAGGAGATTTAGGCCCAGTCTATGGCTTTCAGCAGAGCCATGTTGGGACTGAATATA 20113102 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || ||||| || |||| | || ||||||||||| || | ||||| || | | | Sbjct 20113101 AAGATATGAATTCAGATTACTCAGGTCAAGGAGTAGACCAGCTGCAAAAGGTCACTGACA 20113042 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 ||| ||||| ||||| | |||||||||| || || || ||||| ||| ||| Sbjct 20113041 CAATCAAAACCAACCCTGATGACAGAAGAACCATCAGGTGTGCTTGGAATTCTAGAGACC 20112982 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | ||| |||| ||||||| || | || ||||| || | | | | || | | Sbjct 20112981 TTCCTCAGATGGTGCTGCCTCCTTGCCTCGCCCTCTGCCAGTTCTGCATGGTAAACAGCG 20112922 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||| || || |||| | | || | ||| ||||| ||||| || |||||||| | Sbjct 20112921 AGCTGTCCTGCCAGCTGTACTAGAGGTCAGGTGACATGGGTCTGGGGGTGCCTTTCAACA 20112862 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 | || || || || |||| || |||||||| |||| | |||| | ||| | |||| Sbjct 20112861 TCGCCAGCTACGCCTTGCTCACCTATATGATCACACACATAACAGTCCTGAAACCAGGTG 20112802 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 |||| | || || | ||||| || ||||||||||| ||||| | ||||| | ||| Sbjct 20112801 ACTTTTTACATACGTTGGGAGATGCACATATTTACCTGAATCACGTTGAACCCCTGAAAG 20112742 Query 20633 TACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAG 20692 | ||| | ||| |||||| || ||||| | || |||| || ||| ||| | Sbjct 20112741 TTCAGCTCCAGCGAGAACCAAGACCTTTCCCCAAGCTCAACATT-CT-GAAAAGTTGAGA 20112684 Query 20693 ATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAA 20752 |||| | ||||| |||||||| || || | | |||| || || || ||| | | Sbjct 20112683 CTATTGATGATTTCAAAGCTGAAGACTTCCAGATTCAAGGATACAACCCTCATCCAACTA 20112624 Query 20753 TTCCAATGGAAATGTCTGTTTA 20774 || ||||| |||| |||| || Sbjct 20112623 TTAAAATGG-AATGGCTGTCTA 20112603 Score = 172 bits (190), Expect = 4e-38 Identities = 376/562 (67%), Gaps = 12/562 (2%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || ||||| || || |||||||| ||||| ||||||||| |||| ||||||||| Sbjct 20066170 AAGAAGGAGATTTAGGCCCAGTGTATGGCTTTCAGTGGAGACATGTTGGGGCTGAATATA 20066111 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || ||||| || |||| | || ||||| | ||| | | ||||| || ||| | Sbjct 20066110 AAGATATGAATTCAGATTACTCAGGTCAAGGTGCAGACCTGCTGCAAAAGGTAATTGACA 20066051 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 ||| |||| ||||| | |||||||||| || |||| | ||||| ||| ||| Sbjct 20066050 CAATCGAAACCAACCCTGATGACAGAAGAACCATCATATGTGTTTGGAATTCTAGAGACC 20065991 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | ||| |||| ||||||| || || | || ||||| ||| | | | || | | Sbjct 20065990 TTCCTCAGATGGTGCTGCCTCCTTGCCACACCCTCTGCCAGTTTGCC-TGGTGAACAGCG 20065932 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||| || || |||| || | || | ||| ||||| ||||| || ||| |||| | Sbjct 20065931 AGCTGTCCTGCCAGCTGTACCAGAGGTCAGGTGACATGGGCCTGGG-GTGCCTGTCAACA 20065873 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 | || || || || ||| |||| ||||| | |||| | || | |||| Sbjct 20065872 TGGCCAG----------CTCACCTATGTGATCGCACACATCACAGGCCTGAAGGCAGGTG 20065823 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 |||| || |||| | |||| || ||||||||||| |||||| | ||||| | ||| Sbjct 20065822 ACTTCGTACACATGTTCAGAGATGCACATATTTACCTGAATCATGTTGAACCACTGAAAG 20065763 Query 20633 TACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAG 20692 | ||| | ||| |||||| || ||||| | || |||| ||| ||| | Sbjct 20065762 TTCAGCTCCAGCGAGAACCAAGACCGTTCCCCAAGCTCAACATTCTGTGAAAAGTTGAGA 20065703 Query 20693 ATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAA 20752 | | | ||||| |||| ||| || || | | |||| || || |||||| | | Sbjct 20065702 CCACTGATGATTTCAAAGGTGAAGACTTCCAGATTCAAGGATACAACCCCCATCCAACTA 20065643 Query 20753 TTCCAATGGAAATGTCTGTTTA 20774 || |||||||||| |||| || Sbjct 20065642 TTAAAATGGAAATGGCTGTCTA 20065621 Score = 156 bits (172), Expect = 3e-33 Identities = 275/401 (69%), Gaps = 0/401 (0%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || ||||| || || || ||||| ||||| ||||| ||| |||| ||||||||| Sbjct 20154029 AAGAAGGAGATTTAGGCCCAGTCTATGGCTTTCAGTGGAGCCATGTTGGGGCTGAATATA 20153970 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || ||||| | |||| | || ||||| | ||| | | ||||| || | | | Sbjct 20153969 AAGATATGAATTCTGATTACTCAGGTCAAGGTGCAGACCTGCTGCAAAAGGTCACTGACA 20153910 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 ||| ||||| ||||| | |||||||||| || || || ||||| ||| ||| Sbjct 20153909 CAATCAAAACCAACCCTGATGACAGAAGAACCATCAGGTGTGCTTGGAATTCTAGAGACC 20153850 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | ||| |||| ||||||| || | || ||||| || | ||| | || | | Sbjct 20153849 TTCCTCAGATGGTGCTGCCTCCTTGCCTCGCCCTCTGCCAGTTCTGCGTGGTGAACAGCG 20153790 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||| || || |||| || | || | ||| ||||| |||| || |||||||| | Sbjct 20153789 AGCTGTCCTGCCAGCTGTACCAGAGGTCAGGTGACATGGGTCTGGCGGTGCCTTTCAACA 20153730 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 | || || || || |||| || || ||||| ||||| | |||| | || |||||| Sbjct 20153729 TCGCCAGCTACGCCTTGCTCACCTACATGATCGCACACATAACAGTCCTGAAGCCGGGTG 20153670 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 |||| | || || | ||||| || ||||||||||| ||| Sbjct 20153669 ACTTTTTACATACGTTGGGAGATGCACATATTTACCTGAAT 20153629 >seq34 Length=22856737 Score = 147 bits (162), Expect = 2e-30 Identities = 368/555 (66%), Gaps = 3/555 (1%) Strand=Plus/Minus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 ||||| || || || ||||| ||||| |||||||||||||| ||| ||||| || | | Sbjct 22207873 GATTTAGGCCCAGTCTATGGCTTTCAGTGGAGACATTTTGG-GCTAAATATAAAGATAGG 22207815 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340 || || |||| | || ||||||||||| || | ||||| |||| | | ||| ||| Sbjct 22207814 AATTCAGATTACTCAGGCCAAGGAGTAGACCAGCTGCAAAAGGTTACTGACACAATCAAA 22207755 Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 || ||||| | ||| ||||||| || || || ||||| | ||||| | ||| Sbjct 22207754 ACCAACCCTGATGACCGAAGAATCATCAGGTGTGCTTGGAATTCAAAAGACCTTCCTCAG 22207695 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 |||| ||||||| || || | |||| || | | | | ||| || |||| Sbjct 22207694 GTGGCGCTGCCTCCTTGCCACGCTCCCTGCCCGTTCTGCATGGTGAATGGCGAGCTGTCC 22207635 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || || |||| || | || | ||| ||||| ||| | | ||||||| || || || Sbjct 22207634 TGCCAGCTGTAGCAGAGGTCAGGTGACATGGGCCTGAGGTTGTCTTTCAACATCGCCAGG 22207575 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTC 20580 || || |||| | || ||||| ||||| | |||| | || | |||||||| || Sbjct 22207574 TAAGCCTTGCTCATCTACATGATCGCACACATCACAGGCCTGAAGCCAGGTGACTTTGTA 22207515 Query 20581 CA-CACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTT 20639 || || | ||||| || |||||||| ||| ||||| | ||||| | ||| | ||| | Sbjct 22207514 CATAACGTTGGGAGATGCACATATTTA-CTTGATCATGTTGAACCCCTGAAAGTTCAGCT 22207456 Query 20640 AACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAA 20699 | | |||||| || ||||| | | |||| |||| ||| | ||| | Sbjct 22207455 CTAGCAAGAACCAAGACCCTTCCCCAAGTTCAACATTCTGCGAAAAGTTGAGACCATTGA 22207396 Query 20700 CGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAAT 20759 | || ||||||||| || || | | ||||| | || || ||| | | | || Sbjct 22207395 TGGTTCTAAAGCTGAAGACTTCCAGATCGAAGGATCCAACCCTCATCCAACCACTAAAAC 22207336 Query 20760 GGAAATGTCTGTTTA 20774 ||||||| |||| || Sbjct 22207335 GGAAATGGCTGTCTA 22207321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399143123807890