Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 seq8 122 7e-23 seq4 100 2e-16 seq1 98.7 8e-16 seq124 96.9 3e-15 seq93 95.1 1e-14 seq16 89.7 4e-13 seq32 82.4 6e-11 >seq5 Length=88520344 Score = 127 bits (140), Expect = 2e-24 Identities = 156/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||| ||||||||||| || ||| | || ||| Sbjct 40362625 ACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCC 40362684 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || |||| ||||| ||||| || || | ||||||||||| Sbjct 40362685 AGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 40362744 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | ||| | | ||||||||| | ||| || |||||| Sbjct 40362745 ATTTTGGCTTTGACATTCTCGATGGTGT-CGCTGGCTCCACCTCAAGGGTGATGGTCTTG 40362803 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||||||| |||||||||||||| |||||||| Sbjct 40362804 CCCGTCAGGGTCTTCACAAAGATGTGCATGTT 40362835 Score = 105 bits (116), Expect = 5e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGA-ATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||||||||| ||| ||| ||||| ||||||||||| || || | || || Sbjct 1010649 ACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTGCAGCCATCCTC 1010708 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| ||||| || || || |||| |||| ||||| || || | ||||||||||| Sbjct 1010709 CAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTG 1010768 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||||| || || | | | | |||| | ||||||||| | ||| || ||||| Sbjct 1010769 GATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTT 1010828 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| |||||||||||||| ||||| Sbjct 1010829 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq8 Length=79101790 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||| ||||||||||| || ||| | || ||| Sbjct 4905348 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCAAGAGAGTGCGGCCATCCTCC 4905407 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || |||| ||||| ||||| || || | ||||||||||| Sbjct 4905408 AGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 4905467 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | ||| ||||| | ||| || |||||| Sbjct 4905468 ATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTG 4905527 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||||| |||||||||||||| |||||||| Sbjct 4905528 GCCGTCAGGGTCTTCACAAAGATCTGCATGTT 4905559 >seq4 Length=91125384 Score = 100 bits (110), Expect = 2e-16 Identities = 154/214 (72%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||| ||||||||||| ||| ||| | || ||| Sbjct 27213458 ACCAAGTGCAG-GTGGACTCTTTCTGGATGTTGTAGTCCGAGAGT--GCGGCCATCCTCC 27213514 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC-CGC 45246 || ||||| || || || |||| | ||| ||||| ||| | | ||||||||||| || Sbjct 27213515 AGCTGTTTACCAGCAAAAATCAGACACTGCTGGTCTGGAAGAATGCCCTCCTTGTCTCGG 27213574 Query 45247 AATTTTTTGCTTA-ACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 | |||| |||| || | | | ||||| | ||| |||| | ||| | |||| Sbjct 27213575 A--TTTTAGCTTTGACATTCTCGATGCTGTTGCTGGGCTCAGCCTCAAGGGTGACGGTCT 27213632 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||||||| | ||||||||||||| ||||| || Sbjct 27213633 TGCCCGTCTGGGTCTTCACAAAGACCTGCATCTT 27213666 >seq1 Length=111700974 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || ||| ||||| |||||||| || ||| ||| | || ||| Sbjct 26898471 ACCAAGTGCAGGGTCGACTC-TTCTGGATGTTGTAATCCGAGAGT--GCGGCCATCCTCC 26898527 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || |||| ||||| |||| ||| || | ||||||||||| Sbjct 26898528 AGCTGTTTCCCAGCAAAAATCAGACGCTGCTGGTTGGG-GGAATGCCCTCCTTGTCTTGG 26898586 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | |||| |||| | ||| || |||||| Sbjct 26898587 ATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCCCCTCAAGGGTGATGGTCTTG 26898646 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | ||| |||||||||||||| ||||| || Sbjct 26898647 CCTGCCAGGGTCTTCACAAAGATGTGCATCTT 26898678 >seq124 Length=2835626 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGT-CGTT-CAGTTGGCGATCGTCGT 45185 ||||||||||| ||| ||| ||||| |||||||||| || |||| || | || | Sbjct 1071990 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTGCGAGACAGT--GCTGCCATCCT 1071933 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 |||| ||||| || || || | || |||| ||||| || || | ||||||||||| Sbjct 1071932 CCAGCTGTTTACCAGCAAAAACCAGACGCTTCTGGTCCGGGGGAATGCCCTCCTTGTCTT 1071873 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 |||| || || | ||| | |||||| ||||||||| | || || |||| Sbjct 1071872 GGGTTTTGGTTTTGACATTCTCCATGGTGTCCCTGGGCTCCACCTCAAGGGCGATGGTCT 1071813 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||| ||||||||||| || ||||| Sbjct 1071812 TGTCCATCAGGGTCTTCACAAACATCTGCAT 1071782 >seq93 Length=6471344 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| || ||||| ||||||||||| || ||| | || || Sbjct 5958107 ACCAAGTGCAG-GTGGGATCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCACC 5958049 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || ||| ||||| ||||| || || | ||||||||||| Sbjct 5958048 AGCTGTTTGCCAGCAAAAGTCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 5957989 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | | |||| | ||| ||| | |||| | |||||| Sbjct 5957988 ATTTTAACCTTGACTTTCTCGATGGTGTCACGGGGCTCACTCTCAAGGGTAGTGGTCTTG 5957929 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| |||| |||||||||||||| ||||| Sbjct 5957928 CCCATCAGGGTCTTCACAAAGATCTGCAT 5957900 >seq16 Length=57704787 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 45113 CCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGT 45172 |||||||| | | |||| |||||| || || ||||| |||||||||| | | Sbjct 36557361 CCTCTCAAGCGTGGGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTTAGACTGG 36557420 Query 45173 TGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACA 45232 ||| | || ||||| ||||| || || || |||| || ||| ||||| ||||| | Sbjct 36557421 GTGCGGCCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATG 36557480 Query 45233 CCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCC 45292 || |||||||| || ||| | | | | | | | || ||| ||||||||| Sbjct 36557481 CCTTCCTTGTCTTGGATCTTTGCCCTGATATTCTCAATGGTGGCCCTGGGCTCCACCTCA 36557540 Query 45293 ACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||| || ||||| || || | ||| ||||||||||| ||||| Sbjct 36557541 AGGGTGATGGTCTTACCAGTTACAGTTTTCACAAAGATCTGCAT 36557584 >seq32 Length=28911305 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/217 (69%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||| ||||||||||| || ||| | || ||| Sbjct 25037327 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCC 25037268 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCG-----GGAGGCACACCCTCCTTGT 45242 || || || || || | |||| ||||| |||| | || || | |||||||||| Sbjct 25037267 AGCTGCTTACCAGCAGAAATCAGACGCTGCTGGTGGGGGGAGGGGGGATGCCCTCCTTGT 25037208 Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302 | ||||| || || | | | | | ||| | | ||| |||| | ||| | | Sbjct 25037207 CTTGGATTTTGGCTTTGACAGTCTCGATGGTGT-CGCTGGCTCAGCCTCAAGGGTGACGG 25037149 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||||| ||||| ||||||||| |||| ||||| || Sbjct 25037148 TCTTGCCTGTCAGGGTCTTCACAGAGATCTGCATCTT 25037112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395034744546442