Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq51 215 5e-51 seq25 210 2e-49 seq92 192 6e-44 seq24 107 2e-18 seq120 87.8 2e-12 seq1 84.2 2e-11 >seq51 Length=16359109 Score = 215 bits (238), Expect = 5e-51 Identities = 566/850 (67%), Gaps = 18/850 (2%) Strand=Plus/Plus Query 13907 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13966 ||||| | ||||| || | ||||| || ||||||||||| || || |||||||| || Sbjct 9671624 CCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAC 9671683 Query 13967 ATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCT 14026 || || |||||||| |||||||| ||| | | |||| || | | |||| ||||| Sbjct 9671684 ATGTTCTCCATAAAGTCAAATGGGTTTTCTACTTTGAACAGCTTGTTAAAACCCAGTTCC 9671743 Query 14027 AATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCT 14086 | | || || || || | ||| ||||| | || | ||| ||| |||||||| || Sbjct 9671744 AGCATTAGCCTGTCTGCCACGAATTCAATGTGCTGTGTCATCAAAGTGCAATTCATTCCA 9671803 Query 14087 ATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTT 14146 || ||||| | || | | || | ||||| | ||||| ||||| | | Sbjct 9671804 ATCAGTTTCAAGGGCAAGGCTTCCGTAAGGAATTCCTGTTCTACTCTGACAGCAT---TC 9671860 Query 14147 ATAATAATCG-TAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAA 14203 | ||| || | || | || | ||||| | || ||||| || | | Sbjct 9671861 ACAATGATTTCTTGTACTCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAACACGAGG 9671920 Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||| ||||| || | ||||||||||| | ||||| ||| || ||||| || | Sbjct 9671921 CAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCGAATAACTTCATTGGAAAACGTGAGG 9671980 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 |||||||| | ||||| ||| || | ||| || || | || || || ||||| ||||| Sbjct 9671981 CCTGGCATTAGTCCTCCTTTCTTGAGCCAGAAGATGGAGGCAAACGAACCGGAGAAGAAG 9672040 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT-TTTGTTCGA 14382 || || || ||||| ||||| |||| | || |||||| | | | |||| ||||| Sbjct 9672041 ATGCCTTCCACTGCTGCAAAGGCTACAACTCTCTCTCCATA-GGTACTTTCTTTGTCGCC 9672099 Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 ||||| ||||| || | || || || | | || |||||| || | ||| | Sbjct 9672100 AATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCCGTGGCACT 9672159 Query 14443 AAATAAATGTTCCTTCTCTTTAGTACT-TGAAATGTATGTATCAATAAGTAAGCTATACA 14501 || | || ||| | ||||| | ||| | |||||| || ||||| || | ||||||| Sbjct 9672160 GAAGAGATACTCCCTTTCTTT-GGACTCTTTAATGTAAGTGTCAATCAGGAGACTATACA 9672218 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 ||||||| |||||||| ||||| || || || |||||||| || | | || |||| Sbjct 9672219 TTTCAGAATGTATGTTATCCATTGCAATTTGGAAACCATAGAACTAGCGGGCCTCTGTAA 9672278 Query 14562 ATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 || | ||| | ||||| || ||| ||||||| || || || ||||| |||| Sbjct 9672279 TCTGAATGTCTTGGCTAAATCGCTCCACCAGGTTTTCATGCACGATGCCGTCACTGGCTG 9672338 Query 14622 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG-AGTTTTTTCCAA 14680 |||| || |||| || || || | | ||| ||| |||| || || ||| Sbjct 9672339 CAAAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCA-GGCTGCAGGGCTTCCCAG 9672397 Query 14681 TCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTT 14738 | ||| || || ||||||||||| || | || | |||||||| || |||||| Sbjct 9672398 T--GCTGAATGTCTTTAGAAAGATCCAC--CCTCGGCCGTCCAAAAGGAGGCCTCAGCTT 9672453 Query 14739 TTTTATACAT 14748 | |||||||| Sbjct 9672454 TCTTATACAT 9672463 >seq25 Length=39250790 Score = 210 bits (232), Expect = 2e-49 Identities = 588/894 (66%), Gaps = 20/894 (2%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 || || |||||| | ||||| || | ||||| || ||| ||||| | || || |||||| Sbjct 34005957 ATCACTCCCATTCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGCTCGTCTTCCCTTCC 34005898 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCT 14020 || || || || |||||||| ||||||| ||| | | |||| || | | |||| Sbjct 34005897 AGGGAAATGTTCTCCATAAAGTCAAATGAGTTTTCTACTTTGAACATCTTGTTAAAACCC 34005838 Query 14021 AGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTC 14080 ||||| | | || || | || | ||| |||| | || | ||| ||| |||||| Sbjct 34005837 AGTTCCAGCATTAGCCTGTTTGCCACGAATTCAACGTGCTGTGTCATCAAAGTGCAATTC 34005778 Query 14081 ATACCTATTAGTTTTACAGGAAT---TATAT-TGGTTAAAAATTCTTTTTCTATAGACAC 14136 || | || | || || | || | || ||| ||||| | |||||| || Sbjct 34005777 ATTTCAATCAACTTCACGGCAAGGCCTCCATATGG-----AATTCCTGTTCTATCCTGAC 34005723 Query 14137 AGCCTCGTTTATAATAA-TCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAA 14195 ||| | ||| || | ||| | | | | ||||| | || ||||| | Sbjct 34005722 AGCATTCACTATGATTTCTTGTACTCTCTGCTCT-GAAGGTTTGTGCAGCAGGTGTTTGA 34005664 Query 14196 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255 | || | || ||||| |||| || | ||||||||||| ||||||||||| || |||| Sbjct 34005663 ACATGAGGCAGGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGTTCCTTGGAAA 34005604 Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315 | || | |||||||| | ||||||||| || | ||| || || | || || || |||| Sbjct 34005603 ACGTGAGGCCTGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCAAACGAACCGG 34005544 Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375 | ||||| || || || ||||| ||||| |||| | ||| ||||| | | |||| || Sbjct 34005543 AGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAGGTAGCTTCTT 34005484 Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 ||| ||||| ||||| || | || || || | | || |||||| |||| Sbjct 34005483 TGTCGCCAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCAA 34005424 Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGC 14495 | |||| || | || ||| | || || | || | | |||| ||||| || | | Sbjct 34005423 TGACATTGAAGAGATACTCCCTTTCCTTGGAACCT----TTAATGTGTCAATCAGGAGAC 34005368 Query 14496 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14555 ||||||||||||| ||||||||||||||||| || || || ||||| ||||| | || | Sbjct 34005367 TATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAACGGGCCT 34005308 Query 14556 CTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 ||| || || ||| | ||||| || ||| || |||| ||||| |||||| Sbjct 34005307 CTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAGGTTCTCATGCACTAT-GCATCAC 34005249 Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTT 14675 | | |||||| || |||| || || || | | ||| ||| | || || Sbjct 34005248 TGGTTGCAAAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCAGGCTTCAGGGCTT 34005189 Query 14676 TCCAATCGGCTAAAT--CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC 14733 ||| | ||| | | | ||||||||||| | || || | |||||||| || | Sbjct 34005188 CCCAGT--GCTGAGTGGCTTTAGAAAGATCCAGCTCCTCGGCCGTCCAAAAGGAGGCCTC 34005131 Query 14734 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 |||||| |||||||| ||| || || | || || ||||| || ||||| Sbjct 34005130 AGCTTTCTTATACATCTGCCAAATGTCATGGTACTCGATGGGAAAGACAACAAA 34005077 >seq92 Length=6660306 Score = 192 bits (212), Expect = 6e-44 Identities = 578/885 (65%), Gaps = 38/885 (4%) Strand=Plus/Plus Query 13866 CATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCAC 13925 ||||||| | ||| ||| || || | | || || || ||||| || | || || | Sbjct 3253935 CATCTAAGGTAAAGGAATTCTCTGTTTGGCTTGACATCACTCCCATCTTCTAGTACTCGC 3253994 Query 13926 TAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAA 13985 ||||| || ||||||||||| || || |||||||| || || || |||||||| |||| Sbjct 3253995 CTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAAATGTTCTCCATAAAGTCAA 3254054 Query 13986 ATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||| ||| | | |||| || | |||| | ||| | | || || || || | Sbjct 3254055 ATGGGTTTTCTACTTTGAACATCTTGTTGAAACCCAATTCCAGTGTTAGCCTGTCTGCCA 3254114 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||| ||||| || | | ||||||| |||||||| || || || || || | | Sbjct 3254115 CGAATTCAATGTACTATGTCATTAAAGTGCAATTCATTCCAATCAGCTTCACGTGCAGGG 3254174 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | || | ||||| | |||| | ||||| | | || | | ||| | | Sbjct 3254175 CCTCCGTCAGGAATTCCTGTTCTCTCCTGACAGCATTCATGAT--TTCTTGTACTCTCTG 3254232 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | | ||||| || || ||||| || | | || ||||||||||| || | | Sbjct 3254233 C-TCCGAAGGGTTGTACAGCAGGTGTTTGAACACGAGGCAGGCAAAATCACATTGCAAAC 3254291 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| ||||||||||| || ||||||| | || ||||| | ||||||||| | Sbjct 3254292 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGAGAGGCCAGGCATTAGTCCTCGTTTCT 3254351 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| || || | || ||||| || | |||| ||||| || |||| ||||| | Sbjct 3254352 TGAGCCAGAAAATGGATGCAAATGAACC---AGAGAAGATTCCTTCCACTGTCGCAAAGG 3254408 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 ||| | ||| ||||| | | ||| |||||| ||||| ||||| || | Sbjct 3254409 CTACAACTCGCACTCCATAGGTAACTTCTTTGTTTCCAATCCAACGCAAGGCCCAATCTG 3254468 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG 14465 || || | | || |||||||| | | ||||| || | || |||| | || || | Sbjct 3254469 CCTTCACCTTCACACAAGGCATTGTTTAAGTGGCATTGAAGAGATATTCCCTTTCCTTGG 3254528 Query 14466 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAG 14525 | | ||| || || ||||| || | ||||||||||||| || ||||||||||||| Sbjct 3254529 AATCTTTAATATAAGTGTCAATGAGGAGATTATACATTTCAGAATGGATGTTTTCCATAG 3254588 Query 14526 CTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTT 14585 || || || ||| | ||||| || ||| | | | ||||| | Sbjct 3254589 TAATTTGGAAGCCACAGAAACA----------GA-AATT-----TATAGGCTAAATCGCT 3254632 Query 14586 CGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAA 14645 | ||| || ||||| ||||| | |||||| |||||||| || | || ||| | | Sbjct 3254633 CCACCAGGTTCTCATTCACTATGCTATCACTGGCTGCAAAGAAAG--AACGTGTGAT--A 3254688 Query 14646 TAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCT--AAATCCTTAGAAAGATC 14703 | || ||| ||| ||| || || ||| | ||| | ||| ||||| ||||| Sbjct 3254689 TGAAATATCTCTCCTCA-GGC-------TTCCCAGT--GCTGAATATCGTTAGACAGATC 3254738 Query 14704 TACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACAT 14748 || || || | |||||||| ||| ||||||| |||||||| Sbjct 3254739 CACCTCCTCGGCCGTCCAAAAGGAAGCCTCAGCTTTCTTATACAT 3254783 >seq24 Length=44670279 Score = 107 bits (118), Expect = 2e-18 Identities = 232/342 (68%), Gaps = 9/342 (3%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || ||| | || |||| || ||||| |||| ||| ||||||||||| ||||||||| Sbjct 21210701 AGGTGTGTGAACATTAGGCAGGCAAAGTCACGGTGAGAACCCTCATCTCTGCTAATAAGT 21210642 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGC- 14304 | || |||||| | | |||| | |||||||||| | | || ||||||| || Sbjct 21210641 CCATTGACAAATGTGAGGCTTGGCTTTAATCCTCGTTCGGTGAGCCGGAATATTGATGCA 21210582 Query 14305 ---GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCC 14361 ||| | || |||||||| ||||| | |||| ||||| ||| | ||||| Sbjct 21210581 AAAGAACTAACCAGAAAAGAAGATTCCTCCTCCTGCGGCAAAGACTACCACATACTCTCC 21210522 Query 14362 AAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAA 14421 | | | ||||| |||| | ||||| || | |||| || | | || || ||| | Sbjct 21210521 ACAGGCAGCTTTGTTGTGCCCGATCCA-TTGGAAACCCAATCTGTCTCCTTCTTCATACA 21210463 Query 14422 ATCCATTGTTTCAATAGCATTA--AATAAATGTTCCTTCTCTTTAGTACTTGAAATGTAT 14479 |||| | ||||| |||||| | | | || ||| | ||| ||| ||||| Sbjct 21210462 CGGCATTATCTCAATGGCATTACCGAGATAGCCTCTTTCCTTGGAGT-CTT-CAATGTCA 21210405 Query 14480 GTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14521 || |||| ||| | |||||||||||||| |||||||||||| Sbjct 21210404 GTGTCAACAAGGAGACTATACATTTCAGAATGTATGTTTTCC 21210363 >seq120 Length=3276030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 238/363 (66%), Gaps = 20/363 (6%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || ||||| || || || ||||| ||||| || | | ||||||||| |||| |||| Sbjct 2356091 AGGTGTTTGAACATGGGGCAAGCAAAGTCACAGTGCAAACTCTCATCTCTGCTAAGAAGT 2356032 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 || ||||||| | || | ||| | |||| | ||| | |||| || Sbjct 2356031 ATATTGGAAAATG--AGGCCAGACATTAGTCCTTG---------CCAGTAGATTGATGCA 2355983 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGT-------TC 14358 ||||| | |||| | ||||| || ||| ||||| |||| | | | Sbjct 2355982 AATGAATTAGGAAAGTAGATTCCTTCCGCTGTGGCAAAGGCTACAACACACAGCACACTG 2355923 Query 14359 TCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAA 14417 |||| | | |||| ||||| || | ||||| | | ||| || | || || || | Sbjct 2355922 TCCATAGGTAGCTTCTTTGTCTCCA-ATCCAATGCAAGGTCCAATCTGCCTTCTTCTTCA 2355864 Query 14418 TAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGT 14477 | || |||| | | ||| ||| | || | || |||| | ||||| | | || ||| | Sbjct 2355863 CACAAGGCATTTTCTTAATGGCACTGAAGAGATATTCCCTTTCTTTGGAATTTTTAATCT 2355804 Query 14478 ATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAAC 14537 | | ||||||||||| | ||||||||| || ||||||||||||||||| || || || | Sbjct 2355803 AAGCATCAATAAGTAGACCATACATTTCTGACTGTATGTTTTCCATAGCAATTTGGAAGC 2355744 Query 14538 CAT 14540 ||| Sbjct 2355743 CAT 2355741 >seq1 Length=111700974 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 |||||| || ||||| || | |||||||||||||| ||||||||||||||||| || || Sbjct 4137872 AATGTAAGTGTCAATCAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTG 4137813 Query 14533 AAAACCATAAAAACATCTAGCTTCTG 14558 || ||||| ||||| | || |||| Sbjct 4137812 GAAGCCATAGAAACAGCGGGCCTCTG 4137787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482294941653360