Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq92 143 5e-29 >seq92 Length=6660306 Score = 143 bits (158), Expect = 5e-29 Identities = 300/438 (68%), Gaps = 13/438 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| |||| ||||||||||||| | ||| |||| ||||||||||||| Sbjct 3254414 TTGTAGCCTTTGCGACAGTGGAAGGAATCTTCTCT---GGTTCATTTGCATCCATTTTCT 3254358 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | ||||||| ||| | | |||||||| | ||| || | Sbjct 3254357 GGCTCAAGAAACGAGGACTAATGCCTGGCCTCTCATTTTCCAATGAACTTATTAGCAGAG 3254298 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | || ||| | || | || ||||| ||| | |||| ||| | | ||| | | || Sbjct 3254297 ATGAGGGTTTGCAATGTGATTTTGCCTGCCTCGTGTTCAAACA-CCTGCTGT--ACAACC 3254241 Query 102096 CATCAAGAG-AAAGGATTCTTGAAATTGTCACTGAA-GCCGTCCGAATTGAACAAGAATT 102153 | || ||| | || | | |||| ||| |||| || ||| | | ||||| ||||| Sbjct 3254240 CTTC-GGAGCAGAGAGTACAAGAAA---TCA-TGAATGCTGTCAGGAGAGAACAGGAATT 3254186 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || || | |||||| || || | | |||||||| |||| || |||| |||| Sbjct 3254185 CCTGACGGAGGCCCTGCACGTGAAGCTGATTGGAATGAATTGCACTTTAATGACATAGTA 3254126 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 ||||||||| |||||||| | ||| | ||| |||| | | ||| | || || Sbjct 3254125 CATTGAATTCGTGGCAGACAGGCTAACACTGGAATTGGGTTTCAACAAGATGTTCAAAGT 3254066 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||||| || || ||||| || |||||||| || ||||| ||||| ||||| Sbjct 3254065 AGAAAACCCATTTGACTTTATGGAGAACATTTCCCTGGAAGGGAAGACGAACTTCTTTGA 3254006 Query 102334 AAAGAGAGTCGCCGAGTA 102351 |||||||| | |||||| Sbjct 3254005 GAAGAGAGTAGGCGAGTA 3253988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989477470663910