Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq26 156 6e-33 seq66 98.7 1e-15 >seq26 Length=39178583 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| |||| ||| |||||||||||| || | ||||| || |||||||| Sbjct 9902297 GTCTGGAACAACCGTTCATCATCCCATTCTGGATGCTCCTGCTTCAGCACGTCGCACACC 9902238 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||| ||||||| ||||| || | || |||||||| |||||||||||||| ||||| Sbjct 9902237 CTGTTATGTTCCCGAAGCCATATTATGGCATACATCATCAGACCAGGCACCAGCCCAAAG 9902178 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 | || || || ||||| | |||| | ||| ||||| | || ||||||||||| | Sbjct 9902177 ACTTCCTGGCCCACAGCAAAGCGCAGGTGTTCCGGCACATGAGGGGGATAGATCATCTCT 9902118 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCTGA 9864 |||| |||||||| | ||| || ||||| || || || || |||||| Sbjct 9902117 GCCTGAGTGTCTTTGACTGTGGGAGGGTACATCTCTCCATCTATTATCTGA 9902067 Score = 141 bits (156), Expect = 1e-28 Identities = 221/316 (70%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 8659 GAGCTCCTTATTGGGAACTCGGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGAC 8718 |||||| | || || || |||||| | | ||||| || || ||||| | || | Sbjct 9904006 GAGCTCTTGATCTGGGACATTGAACGCAGTATAGGGACAGCCCTTCACGTTATTGCATAT 9903947 Query 8719 TAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCT 8778 ||||||||||| | || | |||| ||| |||| || || ||||| || || || || Sbjct 9903946 AAGAGACTGGATTGAAGCCGTGTTGATGATTTCAAAACCGACTTCTCCACCAAAAGTACT 9903887 Query 8779 GGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGG 8838 || |||||||| || || || || || ||||||||||||| | ||| || || Sbjct 9903886 AGGCTTCCAGTAGTTAGGAGAACATATTGGATTACCCATGAGGCCTTTCAAGGAGAATGG 9903827 Query 8839 AGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAA 8898 || || ||||| | ||| |||| || |||||||| | ||||| |||||||| ||||| Sbjct 9903826 TGCTCCGAGCTCTACCATGGTCTCTCCAAAGATGGCATCTGGACGAGGCTTTTCTACCAA 9903767 Query 8899 GAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGC 8958 | | | |||| ||||| ||| || || || || || || ||| | || ||||| Sbjct 9903766 AAGAGCAGGATACAGCTCCATAGCGTCTATATCACCATAGAGCGCCTCTAACTCAGCAGC 9903707 Query 8959 GATTTCCTTTTCTCCT 8974 |||||||| |||||| Sbjct 9903706 CATTTCCTTCTCTCCT 9903691 Score = 132 bits (146), Expect = 7e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 10026 GTTCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTA 10085 |||||||||||||| |||| |||||| ||||| || || |||||| ||| ||| | Sbjct 9901284 GTTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTG 9901225 Query 10086 AAAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGA 10145 |||||||| || |||||||| ||| |||| || |||||||| | || |||||||||||| Sbjct 9901224 AAAAACTGATGAGTGAAATGCTGGGCAAAGAACGCAAACATCATATTTGTGCCCTGGGGA 9901165 Query 10146 TCGGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAAC 10186 || || |||| | || | |||||| |||||||||||| Sbjct 9901164 TCAGGGATGAACTTTCTTCTCAGAAGAAATTTTTCCACAAC 9901124 Score = 107 bits (118), Expect = 3e-18 Identities = 184/265 (69%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | |||||| ||||| || ||||| ||||| |||| ||||||| || || | Sbjct 9902934 CTTACCCTGCCAGCAATTTGCTTGGTGAATGATTCAACTAAGTGGGTAAGTCCATGCTCC 9902875 Query 9382 ATGAGTATGGAATTGTTGTAAACGAA--GTTAATGTAGTCATACTTTGTTTTATCAATCT 9439 | | | ||||||||||| | || ||| | || |||| |||| ||| | Sbjct 9902874 AGTAACACAGAATTGTTGTACATAAACTGTTGAA--AGCTGTACTCGTGGTTATTAATTT 9902817 Query 9440 CAAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATAC 9499 || | || |||| |||| |||||||||||| | | |||| ||||| ||| || | Sbjct 9902816 GGAAGGTGTCAGGCAAAAGAGGATGCCAGTGATAGAGCGTGTTGAACTCCGAAGCAATCC 9902757 Query 9500 GATTTTGGTACTGGAACGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGT 9559 ||||||||||||||||| |||||||| || || | |||| || || |||| Sbjct 9902756 GATTTTGGTACTGGAACTGTTGGTTGAAGAGCAGCTCTGGGTCAAACTTCAGCTTGAAGT 9902697 Query 9560 GGTAGCCGCTGAGCTGCTGAACATA 9584 | ||||| || || ||||| ||||| Sbjct 9902696 GATAGCCACTCAGGTGCTGCACATA 9902672 >seq66 Length=11165665 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821 || ||||| || || ||||| |||||||| |||| ||||||||| |||| | | ||| Sbjct 10710853 TCACCGCCAAATGTACTGGGCTTCCAGTACTCCGGAGAGCAGATGGGGTTCCCTAGGAGT 10710794 Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881 || ||||||||||| |||||||| | || | || || || || ||||||| ||| ||| Sbjct 10710793 CCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATACTTTCCCCAAAGATGGAGTTCGGA 10710734 Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940 | ||| |||| | | || | ||| ||||||| || | ||| || || || || Sbjct 10710733 AGACACTTCTCCAGAAGCAGCCCCGGGTAGAACTCCATGGCATTGATATCACCATAGAG 10710675 Score = 86.0 bits (94), Expect = 9e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 10029 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCC--TCGCGCCAAATCAGTCCTAA 10086 || |||||||| |||| | || |||||| | || || || ||| | ||| | | Sbjct 10698876 CTCACCCCATGGCCCAAGGCCTTGGTGAAGCCAGGACCCATCTTTCCAGA--AGTTTTGA 10698819 Query 10087 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 10146 | || ||||| || |||||||| |||||||||||||||| | ||||||||| || |||| Sbjct 10698818 AGAATTGGTGGGTAAAATGTTGTGCAAAAAAGGCAAACATGAGGTTGGTGCCTTGAGGAT 10698759 Query 10147 CGGGAGTGAAGGTCCTCCGAAGAAG 10171 | || |||| ||||||| || || Sbjct 10698758 CAGGTATGAACTTCCTCCGGAGCAG 10698734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708450387182880