Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq15 104 2e-17 seq16 102 7e-17 seq8 102 7e-17 seq5 102 7e-17 seq25 95.1 1e-14 seq11 95.1 1e-14 seq1 89.7 5e-13 seq17 82.4 7e-11 >seq15 Length=59122324 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || ||||||||||| ||| |||| ||||| || |||| || || | ||| || Sbjct 22845745 TTAGACACCTCCTCTCAAGTGCAGGACCAGGTGCAGGGTCGATTATTTCTGGATGTTGTA 22845686 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || || ||| | ||| |||||||| || || |||||| | || ||||| || Sbjct 22845685 GTCAGACAGGGTGCAGCCATCTTCCAGCTGCTTCCCAGTAAAGATCAGCCTCTGCTG-TC 22845627 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 ||||| || ||||| ||||| | || ||||||||| | | |||||| | | Sbjct 22845626 AGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGGCCTTCTCAGTGGTGTCACTGGG 22845567 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||||| ||| ||| ||| || ||||| | ||||||||||||||||||| Sbjct 22845566 CTCGACCACAAGGGTGGGGGTCTTACCAGTTACAGTTTTCACAAAGATCTGC 22845515 >seq16 Length=57704787 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 94784 CCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATA 94843 |||||||| || |||| ||||| || ||||| || || | ||| || | | Sbjct 36557361 CCTCTCAAGCGTGGGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTTAGACTGG 36557420 Query 94844 GTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATA 94903 ||| | ||| ||||||||||| || ||||||| | || ||||| || ||||| || Sbjct 36557421 GTGCGGCCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATG 36557480 Query 94904 CCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCA 94963 ||||| ||||| | || |||||| ||| | | ||| | | | || || ||| Sbjct 36557481 CCTTCCTTGTCTTGGATCTTTGCCCTGATATTCTCAATGGTGGCCCTGGGCTCCACCTCA 36557540 Query 94964 ATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| || ||||| | ||||||||||||||||||||| Sbjct 36557541 AGGGTGATGGTCTTACCAGTTACAGTTTTCACAAAGATCTGCAT 36557584 >seq8 Length=79101790 Score = 102 bits (112), Expect = 7e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || || || || | ||| || || | |||| | | Sbjct 4905342 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCAAGAGAGTGCGGCCA 4905401 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||||||||| || |||| || | | ||||| || || ||||| || || ||| Sbjct 4905402 TCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 4905461 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || ||||| | | ||||| | | || || |||| |||||| Sbjct 4905462 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATG 4905521 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || || | || || || |||||||||||||||||| || Sbjct 4905522 GTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCATGTTT 4905560 >seq5 Length=88520344 Score = 102 bits (112), Expect = 7e-17 Identities = 153/216 (71%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || | || || || | ||| || || | |||| | | Sbjct 40362619 CGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCA 40362678 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||||||||| || |||| || | | ||||| || || ||||| || || ||| Sbjct 40362679 TCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 40362738 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || ||||| ||| ||||| || | || || |||| |||||| Sbjct 40362739 TCTTGGATTTTGGCTTTGACATTCTCGATGGTGTC-GCTGGCTCCACCTCAAGGGTGATG 40362797 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || || || ||||||||||| |||||| Sbjct 40362798 GTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCATG 40362833 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGC-ACGTTATAATCGCTCATAGTGTTGGA 94851 |||| ||||||||||| || || || || || | ||| || || | |||| | Sbjct 1010643 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTGCAGCC 1010702 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| || |||| || | ||||| || || ||||| || || || Sbjct 1010703 ATCCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCCTCCTT 1010762 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||| || ||||| ||| ||||| | | || || |||| ||||| Sbjct 1010763 GTCTTGGATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCAAGGGTGAT 1010822 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || ||||||||||||||||| Sbjct 1010823 GGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq25 Length=39250790 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 || ||| |||||||| || || | ||| || || | ||||| | ||| |||||||| Sbjct 16908934 GTACAAGGTAGATTCTTTCTGGATGTTGTAGTCAGACTTAGTGCAGCCATCTTCCAGCTG 16908875 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || ||||||| | || || || || ||||| | ||||| || || | | || Sbjct 16908874 CTTCCCAGCAAAGATCAGCCTCTGGTGGTCAGGAGGGTTGCCTTCCTTATCTTGGACCTT 16908815 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 |||||||| | | ||||| | | ||||| |||| | |||||| || ||||| Sbjct 16908814 -GCCTTGACCTTCTCAATGGTGTCCCTGGGCTCGACCTCAAGGGCGATGGTCTTACCAGT 16908756 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 | ||||||||||||||||||||| Sbjct 16908755 TACAGTTTTCACAAAGATCTGCAT 16908732 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||||||| |||| |||| ||||| || ||||| || || | ||| || || | Sbjct 16909185 CCTCCTCTCAAGCGCAGGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTCCGAC 16909126 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 ||| ||| ||||||||||| || |||||| || ||||| || ||||| Sbjct 16909125 TGTGTGCAACCATCTTCCAGCTGTTTCCCAACAAAGACAGGCCTCTGCTGGTCAGGAGGG 16909066 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||| || || | || ||||||||| | | |||||| | | | ||| Sbjct 16909065 ATGCCTTTCTTATCTTTGATCTTTGCCTTGGCATTCTCAGTGGTGTCACTGGGCTTGACC 16909006 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || | || || || || |||||||||||||| Sbjct 16909005 TCAAGGGTGATTGTCTTCCTGGTCAGGGTCTTAACAAAGATCTGCAT 16908959 >seq11 Length=65385231 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || | ||||||||| |||| |||| ||||| || ||||| || || | ||| || Sbjct 17608106 TTAGACACGTCCTCTCAAACGCAGGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTA 17608047 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || || || | ||| |||||||| || || ||||||| | || |||| || Sbjct 17608046 GTCAGACAGGGTCCAGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCGGCTGGTC 17607987 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 ||||| || ||||| || || | || ||||||||||| | | |||||| || Sbjct 17607986 AGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCA--CTG 17607929 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | |||| |||||||| || | || || || || |||||||||||||| Sbjct 17607928 GGC----TCAAGGGTGATGGTCTTACTGGTCAGGGTCTTGACAAAGATCTGCAT 17607879 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || ||||||| | | ||||||||| ||||| || || || ||| Sbjct 25275651 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGATCAGGAGGCATTCCCTCCTTG 25275592 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || | | | || || | | ||||||| || | | |||| Sbjct 25275591 TCCTGGATCTTGGCCTTCACATCCTCTATCGTATCTGAGGGGTCGACCTCGAGAGGGATG 25275532 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 | | || || || || ||||||||||||||||| || Sbjct 25275531 GGCCTCCCCGTGAGGGTCTTCACAAAGATCTGCATCCT 25275494 >seq1 Length=111700974 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || || || || | ||| ||||| | |||| | | Sbjct 26898465 CGCAGCACCAAGTGCAGGGTCGACTC-TTCTGGATGTTGTAATCCG--AGAGTGCGGCCA 26898521 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||||||||| || |||| || | | ||||| | ||| ||||| || || ||| Sbjct 26898522 TCCTCCAGCTGTTTCCCAGCAAAAATCAGACGCTGCTGGT-TGGGGGAATGCCCTCCTTG 26898580 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || ||||| ||| ||||| | | || | |||| |||||| Sbjct 26898581 TCTTGGATTTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCCCCTCAAGGGTGATG 26898640 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || || ||||||||||| ||||| Sbjct 26898641 GTCTTGCCTGCCAGGGTCTTCACAAAGATGTGCAT 26898675 >seq17 Length=52410456 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || || || || | ||| || || | |||| | |||||| Sbjct 40316208 CACCAAGTGCAGGGTGGACTC-TTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTC 40316266 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| || |||| | | | |||||| || || ||||| || || | ||| | Sbjct 40316267 CAGCTGTTTACCAGCAAAAAGCAGACATTGCTGGTCCGG-GGAATGCCCTCCTGGTCTTG 40316325 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGC-GTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || ||||| | ||| | || ||| | | || || |||| |||||| || Sbjct 40316326 GATTTTGGCTTTGACAGTCTCGATGGCGT-AGCTGGGCTCCACCTCAAGAGTGATGAGTT 40316384 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || |||||||||| |||||| Sbjct 40316385 TGCCTGTCAGGGTCTTCACAAAGACCTGCAT 40316415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448244118216720