Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq35 104 6e-17 seq25 93.3 1e-13 seq51 84.2 6e-11 >seq35 Length=22427959 Score = 104 bits (114), Expect = 6e-17 Identities = 117/154 (76%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| |||||||| || || || ||| Sbjct 214789 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGGACCCCGTACATG 214730 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||||||||| || ||||| ||| |||||||||| |||| || || | ||| || Sbjct 214729 CTCTACAAAGATTCTTGTAACCGGAAGAGCAACCAGCAGAACCTGGGCACCA-TCAAAAG 214671 Query 364231 -AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || || ||| Sbjct 214670 CAGCAACCTGTGCACAGAAATAGTAGAGTATACC 214637 >seq25 Length=39250790 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAA 22491 ||||| |||||||||||||| || ||||| |||| ||| | | | || || Sbjct 34005444 AAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGCGACAAAGAAGCTACCTACGGAGAG 34005503 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 || || | || ||||| | || |||||||| ||||| || || | ||| | ||| Sbjct 34005504 CGAGTTGTAGCCTTTGCAGCAGTGGAAGGCATCTTCTTCTCCGGTTCGTTTGCATCCATC 34005563 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 || ||||| || ||||| | | | ||||| || || |||||||| || || | |||||| Sbjct 34005564 TTCTGGCTCAAGAAACGAGGACTAATGCCAGGCCTCACGTTTTCCAAGGAACTTATTAGC 34005623 Query 22612 CGAGATGAGGGT 22623 ||||||||||| Sbjct 34005624 AGAGATGAGGGT 34005635 >seq51 Length=16359109 Score = 84.2 bits (92), Expect = 6e-11 Identities = 134/192 (70%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAA 22491 ||||| |||||||||||||| || ||||| |||| ||| || | | | || Sbjct 9672132 AAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGCGACAAAGAAAGTACCTATGGAGAG 9672073 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 | || | || ||||| | || |||||||| ||||| || || | ||| | ||| Sbjct 9672072 AGAGTTGTAGCCTTTGCAGCAGTGGAAGGCATCTTCTTCTCCGGTTCGTTTGCCTCCATC 9672013 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 || ||||| || ||| | | | | ||||| || || |||||||| ||||| | ||| || Sbjct 9672012 TTCTGGCTCAAGAAAGGAGGACTAATGCCAGGCCTCACGTTTTCCAATGAAGTTATTCGC 9671953 Query 22612 CGAGATGAGGGT 22623 ||||||||||| Sbjct 9671952 AGAGATGAGGGT 9671941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303213293170364