Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq25 86.0 5e-12 >seq25 Length=39250790 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/200 (71%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| ||||||| || | || || | || |||||| ||| Sbjct 16908731 AATGCAGATCTTTGTGAAAACTGTAACTGGTAAGACCATCGCCCTTGAGGTCGAGCCCAG 16908790 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | ||||| || | | || || ||||||| ||||| || || Sbjct 16908791 GGACACCATTGAGAAGGTCAAGGCAAGGTCCAA-GATAAGGAAGGCAACCCTCCTGACCA 16908849 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTAT 24167 ||||| ||||| | | || ||||| || ||||||| | | | | ||| | | || Sbjct 16908850 CCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCTGCACTAAGTCTG--ACTAC 16908907 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || ||||||||||| Sbjct 16908908 AACATCCAGAAAGAATCTAC 16908927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429891974822310