Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq116 82.4 7e-11 >seq116 Length=3800712 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || |||||||| |||| || ||| ||||||| | || ||||| | Sbjct 1368441 ATGCAAATCTTCGTAAAGACCCTGACTGGGAAAACCATCACCCTGGAGCTGGAGCCCAGC 1368382 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || | |||||| ||||| || ||| || || || || || ||||||||||| Sbjct 1368381 GATGCCATCGAGAGCGTGAAGGGCAAGATCCAGGATAAGGAGGGCAT-CCACCTGACCAG 1368323 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| ||||| || | ||||||| |||||| | |||||||| Sbjct 1368322 CAGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATG-GCGCACTCTCTATGATTACAAC 1368264 Query 25179 ATTCAAAAAGAATC 25192 | || ||||| || Sbjct 1368263 ACCCAGAAAGAGTC 1368250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433283627483630