Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 >seq4 Length=91125384 Score = 107 bits (118), Expect = 2e-18 Identities = 188/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||| || || |||||||||||||| || | ||| || || ||| | || | || | || Sbjct 20112767 GTAAATATGTGCATCTCCCAACGTATGTAAAAAGTCACCTGGTTTCAGGACTGTTATGTG 20112826 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 | | |||||| || | | || |||||||| ||||| ||||| || |||| |||||| Sbjct 20112827 TGTGATCATATAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAAGGCACCCCCAGACCCAT 20112886 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 ||| || ||||||| |||||||| ||||| ||||| | || | | | || || || Sbjct 20112887 GTCACCTGACCTCTAGTACAGCTGGCAGGACAGCTCGCTGTTTACCATGCAGAACTGGCA 20112946 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 | | | || || || ||| ||||| | | ||| | ||||| |||||| | Sbjct 20112947 GAGGGCGAGGCAAGGAGGCAGCACCATCTGAGGAAGGTCTCTAGAATTCCAAGCACACCT 20113006 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464 ||| ||||||| || | || || |||| ||| Sbjct 20113007 GATGGTTCTTCTGTCATCAGGGTTGGTTTTGATT 20113040 Score = 107 bits (118), Expect = 2e-18 Identities = 188/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||| || || |||||||||||||| || | ||| || || || | || | || | || Sbjct 20153635 GTAAATATGTGCATCTCCCAACGTATGTAAAAAGTCACCCGGCTTCAGGACTGTTATGTG 20153694 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 || | ||| || || | | || |||||||| ||||| ||||| || ||| |||||| Sbjct 20153695 TGCGATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAAGGCACCGCCAGACCCAT 20153754 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 ||| || |||||||| |||||||| ||||| ||||| | || | || | || || || Sbjct 20153755 GTCACCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCTGTTCACCACGCAGAACTGGCA 20153814 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 | | | || || || ||| ||||| | | ||| | ||||| |||||| | Sbjct 20153815 GAGGGCGAGGCAAGGAGGCAGCACCATCTGAGGAAGGTCTCTAGAATTCCAAGCACACCT 20153874 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464 ||| ||||||| || | || || |||| ||| Sbjct 20153875 GATGGTTCTTCTGTCATCAGGGTTGGTTTTGATT 20153908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441326444821680