Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 105 7e-18 seq5 102 8e-17 >seq8 Length=79101790 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | | ||||| || || ||||||||||| Sbjct 4905330 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCAAG 4905389 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || |||||||| | | | || |||||||| |||||||| || Sbjct 4905390 AGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 4905449 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| |||||| ||| | | || | ||||||| | | ||| ||| Sbjct 4905450 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACC 4905509 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || | ||||| || || ||||| ||||||||| Sbjct 4905510 TCAAGGGTGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCATG 4905557 >seq5 Length=88520344 Score = 102 bits (112), Expect = 8e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | | | ||| || || ||||||||||| Sbjct 40362607 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAG 40362666 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || |||||||| | | | || |||||||| |||||||| || Sbjct 40362667 AGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 40362726 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| |||||| ||| | | || | ||||||| | | ||||||| Sbjct 40362727 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCGCT-GGCTCCACC 40362785 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || || ||||| || || ||||| || |||||| Sbjct 40362786 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCATG 40362833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496210280041440