Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq26 150 3e-31 >seq26 Length=39178583 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || |||||| | || ||| ||||||| || || || || || || || ||||| ||| Sbjct 9902297 GTCTGGAACAACCGTTCATCATCCCATTCTGGATGCTCCTGCTTCAGCACGTCGCACACC 9902238 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||| ||||| | |||||||| |||| |||||||| | ||| ||||| | ||||| Sbjct 9902237 CTGTTATGTTCCCGAAGCCATATTATGGCATACATCATCAGACCAGGCACCAGCCCAAAG 9902178 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 ||||| | ||||| ||||||||||| | || ||||| | || | ||| | ||| | Sbjct 9902177 ACTTCCTGGCCCACAGCAAAGCGCAGGTGTTCCGGCACATGAGGGGGATAGATCATCTCT 9902118 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCTGA 9969 |||| || |||||||| ||||| || ||||| || || || || | |||| Sbjct 9902117 GCCTGAGTGTCTTTGACTGTGGGAGGGTACATCTCTCCATCTATTATCTGA 9902067 Score = 143 bits (158), Expect = 4e-29 Identities = 211/299 (71%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 8881 GAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGT 8940 |||||| | | ||||| |||||||| || || || || ||||| || | || || Sbjct 9903985 GAACGCAGTATAGGGACAGCCCTTCACGTTATTGCATATAAGAGACTGGATTGAAGCCGT 9903926 Query 8941 TTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGA 9000 || | ||| || ||||| || || || || || || || || |||||||| || || Sbjct 9903925 GTTGATGATTTCAAAACCGACTTCTCCACCAAAAGTACTAGGCTTCCAGTAGTTAGGAGA 9903866 Query 9001 GCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCT 9060 || || || ||||||| ||||||||||| || || || || ||||| | ||| | Sbjct 9903865 ACATATTGGATTACCCATGAGGCCTTTCAAGGAGAATGGTGCTCCGAGCTCTACCATGGT 9903806 Query 9061 CTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGAC 9120 ||| || ||||||||| | ||||| || ||||| || | | ||| || || || | Sbjct 9903805 CTCTCCAAAGATGGCATCTGGACGAGGCTTTTCTACCAAAAGAGCAGGATACAGCTCCAT 9903746 Query 9121 AGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCTACAA 9179 ||| || | || |||||||| || || ||||| ||||| || |||||||| |||| || Sbjct 9903745 AGCGTCTATATCACCATAGAGCGCCTCTAACTCAGCAGCCATTTCCTTCTCTCCTATAA 9903687 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 10118 CGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCT 10177 || |||||||||||| ||||||||| | |||||||| ||||||||| ||| ||| | Sbjct 9901285 CGTTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTT 9901226 Query 10178 AAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGG 10237 ||||| || || || || || || | || || || ||||||| || ||||||||||| Sbjct 9901225 GAAAAACTGATGAGTGAAATGCTGGGCAAAGAACGCAAACATCATATTTGTGCCCTGGGG 9901166 Query 10238 ATCGGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGA 10288 ||| ||||| || | || | | || || ||| ||||||| || | |||| Sbjct 9901165 ATCAGGGATGAACTTTCTTCTCAGAAGAAATTTTTCCACAACCTCTTTTGA 9901115 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 10389 ACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTATA 10448 ||| |||||||| | ||||| |||||||| | || || ||||| || | || || || Sbjct 9900690 ACCCTTCACCCCCATCGGAGTGGGGCAGTCTTGGGGCACAGGAGGAAGGGCTCGGGTGTA 9900631 Query 10449 ATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGCGG 10508 |||||| || || ||| | ||||||||||| |||||||| || | | || || || Sbjct 9900630 ATAGGAGAGGTTGGAATAGGCTTCCCAGCTTTTGTAGCCGTAGTGGACATTATAAGTTGG 9900571 Query 10509 GGGACTGTCAATCA 10522 ||||| ||||||| Sbjct 9900570 TGGACTATCAATCA 9900557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723651990466800