Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq35 95.1 1e-14 seq25 91.5 2e-13 seq1 86.0 7e-12 seq92 84.2 3e-11 seq51 82.4 9e-11 >seq35 Length=22427959 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || || ||||||| |||||||| |||| |||| || || || || || Sbjct 214625 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCTTTTGATGGTGCC 214684 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| ||| || | ||| |||||||||||||| || ||||| Sbjct 214685 CAGGTTCTGCTGGTTGCTCTTCCGGTTACAAGAATCTTTGTAGAGCATGTACGGGGTCCC 214744 Query 106612 CGTCTCCGTCTGTGACT 106628 ||||| ||||| |||| Sbjct 214745 TGTCTCTGTCTGAGACT 214761 >seq25 Length=39250790 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||||||||||| | ||||||||| || || || ||||| Sbjct 34005653 GGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGTTCCTTGGAAAACGTGAGGCC 34005594 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 117391 |||||| || || || ||||| | ||| | || | ||| || || ||||||||||||| Sbjct 34005593 TGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCA-AACGAACCGGAGAAGAAGA 34005535 Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG-AGCGAGACTTTGT-GTC 117449 | || ||||| ||||| || | || ||||| || ||| ||| |||||| | | Sbjct 34005534 TGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAGGTAGC--TTCTTTGTCGCC 34005477 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCT 117481 || ||| || ||||| | |||||||||| Sbjct 34005476 AATCCAACGCAAGGCCCAATCTGCCTTCTTCT 34005445 >seq1 Length=111700974 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||| ||||||||||||||| |||||||| || ||| |||||| ||||| Sbjct 4141351 ATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAAATGTTCTCCAT 4141292 Query 117045 AAAGTCAAATGGATT 117059 |||||||||||| || Sbjct 4141291 AAAGTCAAATGGGTT 4141277 >seq92 Length=6660306 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || |||| ||||||||||||||| |||||||| || ||| |||||| |||||| Sbjct 3253988 TACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAAATGTTCTCCATA 3254047 Query 117046 AAGTCAAATGGATT 117059 ||||||||||| || Sbjct 3254048 AAGTCAAATGGGTT 3254061 >seq51 Length=16359109 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||| ||||||||||||||| |||||||| || ||| ||||| ||||| Sbjct 9671635 ATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGACATGTTCTCCAT 9671694 Query 117045 AAAGTCAAATGGATT 117059 |||||||||||| || Sbjct 9671695 AAAGTCAAATGGGTT 9671709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589918837266480