Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8 123 2e-23 seq5 122 6e-23 seq93 104 2e-17 seq4 102 5e-17 seq61 93.3 3e-14 seq10 93.3 3e-14 seq11 91.5 1e-13 seq1 89.7 3e-13 seq17 87.8 1e-12 seq83 84.2 1e-11 seq124 82.4 5e-11 >seq8 Length=79101790 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||||| | || | || |||| ||| Sbjct 4905348 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCAAGAGAGTGCGGCCATCCTCC 4905407 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || || || |||||||| | || | ||||||||||| Sbjct 4905408 AGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 4905467 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | || | || |||||| || | ||| ||||| | Sbjct 4905468 ATTTTAGCTTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCT 4905525 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | |||| || |||||||||||||||||||| || Sbjct 4905526 TGGCCGTCAGGGTCTTCACAAAGATCTGCATGTT 4905559 >seq5 Length=88520344 Score = 122 bits (134), Expect = 6e-23 Identities = 158/215 (73%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||||||| || | || |||| ||| Sbjct 40362625 ACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCC 40362684 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || || || |||||||| | || | ||||||||||| Sbjct 40362685 AGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 40362744 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | || | || ||| || || | ||| ||||| | Sbjct 40362745 ATTTTGGCTTTGAC--ATTCTCGATGGTGTCGCTGG-CTCCACCTCAAGGGTGATGGTCT 40362801 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 | ||||| || |||||||||||||| ||||| ||| Sbjct 40362802 TGCCCGTCAGGGTCTTCACAAAGATGTGCATGTTC 40362836 Score = 107 bits (118), Expect = 1e-18 Identities = 153/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGA-ATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||||| | ||| |||||||| ||||| |||||||| || | | |||| || Sbjct 1010649 ACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTGCAGCCATCCTC 1010708 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||| || ||||| || || | |||||||| | || | ||||||||||| Sbjct 1010709 CAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTG 1010768 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || || |||||| || || || | || | || ||| || || | ||| ||||| Sbjct 1010769 GATTTTAGCTTTGAC--ATTCTCGATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTC 1010826 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || |||||||||||||||||||| Sbjct 1010827 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq93 Length=6471344 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||||||| || | || |||| || Sbjct 5958107 ACCAAGTGCAG-GTGGGATCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCACC 5958049 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| | || || ||||||||| | || | ||||||||||| Sbjct 5958048 AGCTGTTTGCCAGCAAAAGTCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 5957989 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||||| | || | |||| || |||| || | ||| |||| || Sbjct 5957988 ATTTTAACCTTGACTTTCTCGATGGTGTCACGGGGCTCACTCTCAAGGGTAGTGGTCTTG 5957929 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| | || |||||||||||||||||||| Sbjct 5957928 CCCATCAGGGTCTTCACAAAGATCTGCAT 5957900 >seq4 Length=91125384 Score = 102 bits (112), Expect = 5e-17 Identities = 155/216 (72%), Gaps = 11/216 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||||||| || | || |||| ||| Sbjct 27213458 ACCAAGTGCAG-GTGGACTCTTTCTGGATGTTGTAGTCCGAGAG--TGCGGCCATCCTCC 27213514 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || || | ||||||||| | | | ||||||||||| | Sbjct 27213515 AGCTGTTTACCAGCAAAAATCAGACACTGCTGGTCTGGAAGAATGCCCTCCTTGTCTCGG 27213574 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 || || |||||| || | ||||| | | || |||| | || | ||| | ||| Sbjct 27213575 ATTTTAGCTTTGAC--AT--TCTCGATGCTGTTGCTGGGCTCAGCCTCAAGGGTGACGGT 27213630 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || ||||| | ||||||||||||| |||||| || Sbjct 27213631 CTTGCCCGTCTGGGTCTTCACAAAGACCTGCATCTT 27213666 >seq61 Length=11583899 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| | |||||||| ||||| |||||||| || | || |||| ||| Sbjct 4384769 ACCAAGTGCAGGGTGGTCTCTTTCTGGATGTTGTAGTCCGAGAGCATGCGGCCATCCTCC 4384710 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| | ||| | | | || |||||||| | || | ||||||||||| Sbjct 4384709 AGCTGTTTACTAGCAGAACTCCGACGCTGCTGGTCCAGGGGAATGCCCTCCTTGTCTTGG 4384650 Query 34893 ATCTTCTGTTTGACGGATGCT-ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| || || | | | | || |||| | | | ||| ||||| | Sbjct 4384649 ATTTTAGCTTTGAC--ATTCTCAATGTGTTGCAGGGCTCACCCACAAGGGTGATGGTCTG 4384592 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || |||||| ||||||||||||| Sbjct 4384591 ACCCGTCAGGGTCTTCTCAAAGATCTGCAT 4384562 >seq10 Length=65549256 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 34796 CTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAG 34855 |||| |||| ||||| || ||| | || |||| |||||||| || || ||||| || || Sbjct 13233518 CTGAGTGTTGTAGTCGGACAGGGTATGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAG 13233577 Query 34856 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT 34915 |||||||| || | || | ||||||||||| ||||| || || |||| Sbjct 13233578 CCGTTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTCTAT 13233637 Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975 || ||| || ||| || |||| | ||||| || ||||| || ||||||| |||| Sbjct 13233638 CGTATCAGAGGGCTCGACCTCGAGAGGGATGGTCTTCCCCGTAAGGGTCTTCATGGAGAT 13233697 Query 34976 CTGCAT 34981 |||||| Sbjct 13233698 CTGCAT 13233703 >seq11 Length=65385231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||||| | | ||||| || | | | ||| | || |||||||| || || ||||| || Sbjct 25275684 TTCTGAACGCTGTAGTCAGACAAGGTGCGTCCCTCTTCCAGCTGCTTGCCAGCAAAGATC 25275625 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || |||||||| || | |||| ||||||||||| ||||| || || || Sbjct 25275624 AGCCGTTGCTGATCAGGAGGCATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTCT 25275565 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 |||| || || || || |||| | |||| | |||||||| |||||||||||| Sbjct 25275564 ATCGTATCTGAGGGGTCGACCTCGAGAGGGATGGGCCTCCCCGTGAGGGTCTTCACAAAG 25275505 Query 34974 ATCTGCAT 34981 |||||||| Sbjct 25275504 ATCTGCAT 25275497 >seq1 Length=111700974 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| || ||||| || | || |||| ||||||||||| || ||||| || Sbjct 26898491 TTCTGGATGTTGTAATCCGAGAG--TGCGGCCATCCTCCAGCTGTTTCCCAGCAAAAATC 26898548 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || ||||||| | | || | ||||||||||| || || |||||| || || Sbjct 26898549 AGACGCTGCTGGT-TGGGGGAATGCCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCT 26898605 Query 34914 --ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 || | || | || ||| | || | ||| ||||| || || | || |||||||||| Sbjct 26898606 CGATGGTGTCGCTGGGCTCCCCCTCAAGGGTGATGGTCTTGCCTGCCAGGGTCTTCACAA 26898665 Query 34972 AGATCTGCATATTCGT 34987 |||| ||||| || || Sbjct 26898666 AGATGTGCATCTTTGT 26898681 >seq17 Length=52410456 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||| ||| ||||| |||||||| || | || |||| ||| Sbjct 40316209 ACCAAGTGCAGGGTGGACTCTT-CTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCC 40316267 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| | || | ||||||||| | || | ||||||| ||| Sbjct 40316268 AGCTGTTTACCAGCAAAAAGCAGACATTGCTGGTC-CGGGGAATGCCCTCCTGGTCTTGG 40316326 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | | || | | | || ||| || || | || ||| ||| Sbjct 40316327 ATTTTGGCTTTGACAGTCTCGATGGCGTAGCTGGGCTCCACCTCAAGAGTGATGAGTTTG 40316386 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || || ||||||||||||| |||||| || Sbjct 40316387 CCTGTCAGGGTCTTCACAAAGACCTGCATCTT 40316418 >seq83 Length=8071411 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/220 (71%), Gaps = 17/220 (8%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||||||| || | || |||| ||| Sbjct 6415540 ACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGA--GGGTGCGGCCATCCTCC 6415483 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || || | |||||| | | || | |||||||||| || Sbjct 6415482 AGCTGTTTACCAGCAAAAATCAGATGCTGCTGG--TGGGGGAATGCCCTCCTTGT--CTT 6415427 Query 34893 ATCTTCTG--TTTGACGGATGCTATCGAT---TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| || | ||||| || | || | | || || |||| || Sbjct 6415426 GGATTCTGGCTTTGAC--AT--TCTCGATATGTCGCTGGGCCCCACCTC-ACGGGCGAGG 6415372 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 | || ||||| || | |||||| ||||||||||| | ||| Sbjct 6415371 TCTTGCCCGTCAGGGACTTCAC-AAGATCTGCATCTGCGT 6415333 >seq124 Length=2835626 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| ||||| |||| ||| | | | |||| ||| Sbjct 1071990 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTGCGAGACAGTGCTGCCATCCTCC 1071931 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| | || || | |||||| | || | ||||||||||| Sbjct 1071930 AGCTGTTTACCAGCAAAAACCAGACGCTTCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 1071871 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 | || |||||| || || || | || | || ||| || || | || ||||| | Sbjct 1071870 GTTTTGGTTTTGAC--ATTCTCCATGGTGTCCCTGGGCTCCACCTCAAGGGCGATGGTCT 1071813 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||||||||| |||||||| Sbjct 1071812 TGTCCATCAGGGTCTTCACAAACATCTGCAT 1071782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324600357722256