Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq25 174 2e-38 seq51 167 3e-36 seq92 147 3e-30 seq3 102 1e-16 seq120 89.7 6e-13 seq1 89.7 6e-13 >seq25 Length=39250790 Score = 174 bits (192), Expect = 2e-38 Identities = 326/473 (69%), Gaps = 7/473 (1%) Strand=Plus/Minus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||| |||| || ||||| |||||||| || || | ||| || Sbjct 34005668 TTTGAACATGAGGCAGGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGTTCCTT 34005609 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | |||||||||| |||| ||| || | ||| || || | |||||| || Sbjct 34005608 GGAAAACGTGAGGCCTGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCAAACGA 34005549 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 || || ||||| || ||||| ||||||||||| ||||||| || ||| | || | Sbjct 34005548 ACCGGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAGGTAGC 34005489 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 | || |||||| | |||||||||||| || ||||| ||||| Sbjct 34005488 TTCTTTGTCGCCAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGT 34005429 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 ||||| | || |||||| | | |||| | | || ||| | || ||||| || Sbjct 34005428 CTCAATGACATTGAAGAGATACTCCCTTTCCTTGGAACCT-TTA---ATGTGTCAATCAG 34005373 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 | ||||||||||||||| || || ||||| ||||| || || || ||||| ||||| | Sbjct 34005372 GAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAACG 34005313 Query 37523 AGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 || || | |||| ||||| || | ||| | || | | ||| |||| ||||| Sbjct 34005312 GGCCTCTG-TAATCTGAACTTCTTGGCTAAATCGCTCCACCAGGTTCTCATGCACTAT-G 34005255 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634 ||||||| | |||||||||||| ||| | | ||| |||| ||| || ||| Sbjct 34005254 CATCACTGGTTGCAAAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCA 34005202 >seq51 Length=16359109 Score = 167 bits (184), Expect = 3e-36 Identities = 326/476 (68%), Gaps = 8/476 (2%) Strand=Plus/Plus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||| ||||| || ||||| |||||||| | || | |||||| Sbjct 9671908 TTTGAACACGAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCGAATAACTTCATT 9671967 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | |||||||||| |||| ||| || | ||| || || | ||||| || Sbjct 9671968 GGAAAACGTGAGGCCTGGCATTAGTCCTCCTTTCTTGAGCCAGAAGATGGAGGCAAACGA 9672027 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 || || ||||| || ||||| ||||||||||| ||||||| | | | | | || | Sbjct 9672028 ACCGGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACAACTC-TCTCTCCATAG--GT 9672084 Query 37343 ACT---ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399 ||| | || |||||| | |||||||||||| || ||||| || Sbjct 9672085 ACTTTCTTTGTCGCCAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCAT 9672144 Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459 ||| || | || | |||||| | | |||||| ||| | || ||||| ||||| Sbjct 9672145 TGTCTCCGTGGCACTGAAGAGATACTCCCTTTCTTTGGACTCTTTAATGTAAGTGTCAAT 9672204 Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519 || | ||||||||||||||| || || || || || || || || |||||||| || | Sbjct 9672205 CAGGAGACTATACATTTCAGAATGTATGTTATCCATTGCAATTTGGAAACCATAGAACTA 9672264 Query 37520 CCTAGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTA 37578 | || || | |||| |||| || | ||| | || | | |||||||| || | Sbjct 9672265 GCGGGCCTCTG-TAATCTGAATGTCTTGGCTAAATCGCTCCACCAGGTTTTCATGCACGA 9672323 Query 37579 TCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634 | || ||||| |||||||||||||| ||| | | ||| |||| ||| || ||| Sbjct 9672324 TGCCGTCACTGGCTGCAAAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCA 9672379 >seq92 Length=6660306 Score = 147 bits (162), Expect = 3e-30 Identities = 379/574 (66%), Gaps = 35/574 (6%) Strand=Plus/Plus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||||||||| || ||||| |||||||| || || | |||||| Sbjct 3254257 TTTGAACACGAGGCAGGCAAAATCACATTGCAAACCCTCATCTCTGCTAATAAGTTCATT 3254316 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| | | || ||||||| |||| ||| || | ||| || || | |||||| || Sbjct 3254317 GGAAAATGAGAGGCCAGGCATTAGTCCTCGTTTCTTGAGCCAGAAAATGGATGCAAATGA 3254376 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 |||| |||| || ||||| |||| ||||| ||||||| || || | || | Sbjct 3254377 ACCAG---AGAAGATTCCTTCCACTGTCGCAAAGGCTACAACTCGCACTCCATAGGT--A 3254431 Query 37343 ACT--ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATT 37400 ||| | | |||||| | |||||||||||| | || ||||| ||| Sbjct 3254432 ACTTCTTTGTTTCCAATCCAACGCAAGGCCCAATCTGCCTTCACCTTCACACAAGGCATT 3254491 Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATT 37460 |||| | | || || |||||| | | |||| | |||| | |||||||| ||||| Sbjct 3254492 GTTTAAGTGGCATTGAAGAGATATTCCCTTTCCTTGGAATCTTTAATATAAGTGTCAATG 3254551 Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520 || | | ||||||||||||| || || ||||| |||| || || || ||| | ||| Sbjct 3254552 AGGAGATTATACATTTCAGAATGGATGTTTTCCATAGTAATTTGGAAGCCACAGAAA--- 3254608 Query 37521 CTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580 |||| |||| || | ||| | || | | ||| ||||| ||||| Sbjct 3254609 -------CAGA-AATT---TATAG--GCTAAATCGCTCCACCAGGTTCTCATTCACTATG 3254655 Query 37581 CCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGAT 37640 | |||||| |||||||||| |||||| | | ||| |||| ||| || || Sbjct 3254656 CTATCACTGGCTGCAAAGA----AAGAACGTGTGATATGAAATATCTCTCCTC------- 3254704 Query 37641 AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTT 37700 | || ||| | | |||||| || || | ||| || || || | |||||||| Sbjct 3254705 -AGGCTTCCCAGTGCTGAATATCGTTAGACAGATCCACCTCCTCGGCCGTCCAAAAGGAA 3254763 Query 37701 GCCAATGCACGTTTATACATCGTCCAAATATCAT 37734 ||| || ||||||||| |||||| |||| Sbjct 3254764 GCCTCAGCTTTCTTATACATCTGCCAAATGTCAT 3254797 >seq3 Length=92262745 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | ||| |||| | |||||| || | Sbjct 36784331 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTCAGTCCCGGCAGAAGACCTCTCTTCT 36784272 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 36784271 TTAACCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 36784212 Query 37318 CTAC 37321 | || Sbjct 36784211 CCAC 36784208 >seq120 Length=3276030 Score = 89.7 bits (98), Expect = 6e-13 Identities = 175/256 (68%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 37368 GTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGttt 37427 |||||||||||||| || ||||| ||| | | ||| || | |||||| | | Sbjct 2355885 GTCCAATCTGCCTTCTTCTTCACACAAGGCATTTTCTTAATGGCACTGAAGAGATATTCC 2355826 Query 37428 ttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 |||||| || | | || |||| |||||| |||| || ||||||||| || || || Sbjct 2355825 CTTTCTTTGGAATTTTTAATCTAAGCATCAATAAGTAGACCATACATTTCTGACTGTATG 2355766 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGAACATCGTT 37546 ||||| ||||| || || || |||| ||| | | | | |||| || || || | Sbjct 2355765 TTTTCCATAGCAATTTGGAAGCCATCGAAATAGGGGCCCGCCG-TAATCTGGACTTCATG 2355707 Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 | ||| | || | ||||||| | | ||||| ||||||| ||| ||||| ||| || Sbjct 2355706 ACTAAATCACTCCACCAAGTTTTAACTCACTATTCCATCACCTGCTACAAAGGAAGTCAG 2355647 Query 37607 AACATATTTTATAAAA 37622 ||||| | |||| || Sbjct 2355646 AACATGTGATATACAA 2355631 >seq1 Length=111700974 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| ||||| || | || ||||||| |||| || || Sbjct 4139651 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATTAGTCCTCGCTTCTTG 4139592 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| || || | ||||| || || || ||||| || ||||| ||||||||||| ||| Sbjct 4139591 AGCCAGAAGATGGAGGCAAATGAACCGGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCT 4139532 Query 37320 ACAA 37323 |||| Sbjct 4139531 ACAA 4139528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592254591928080