Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq30 82.4 2e-11 >seq30 Length=30269221 Score = 82.4 bits (90), Expect = 2e-11 Identities = 181/266 (68%), Gaps = 14/266 (5%) Strand=Plus/Plus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| ||||| || ||| ||||||| | || || || || || || | || ||||| Sbjct 16189141 TGGGTGTTAGGGAAGAGTAGCTCCACGCTCTGGCTTGGCTGCAAAACACTTCATAGATGT 16189200 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| | ||| ||| | ||| || || |||||||||||| | |||||||| Sbjct 16189201 AGGAGCTGGTGTCA--GATGAAGATTATAGAGGAAATGTTGGTGTTGTTCTGTTTAATTT 16189258 Query 1085 TAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGAAAA 1144 | || | | ||| | | || || ||| | ||||| ||| | |||||||| Sbjct 16189259 TGGCAAAGAAATATTTGAAGTCAAAAAGGGCGATCGAATTGCACAGCTCATTTGTGA--- 16189315 Query 1145 GGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC---CTT-AGAGGATTCGGAAAGGGG 1198 || | |||| ||||| |||||| ||| ||| ||| || || | |||||||| Sbjct 16189316 -GCGGATTTTTTATCCA--GAAATAGAGGAAGTTCAAGCTTCGGATGACACTGAAAGGGG 16189372 Query 1199 TTCTGCAGGATTTGGGTCTACCGGAA 1224 || | || |||||||| || |||| Sbjct 16189373 CTCAGGGGGCTTTGGGTCCACTGGAA 16189398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138667763216712