Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 1e-13 seq29 89.7 4e-13 >seq25 Length=39250790 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 101272 GGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACC 101331 |||||||||||| || || ||||| || | |||| | | |||| |||| ||||| || Sbjct 16908928 GGTAGATTCTTTCTGGATGTTGTAGTCAGACTTAGTGCAGCCATCTTCCAGCTGCTTCCC 16908869 Query 101332 TGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTT 101391 ||||| |||| | ||| || || || || ||||||| |||||||| | || || Sbjct 16908868 AGCAAAGATCAGCCTCTGGTGGTCAGGAGGGTTGCCTTCCTTATCTTGGA-CCTTGCCTT 16908810 Query 101392 TACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451 || | || | ||||| | || || ||||| | || || || || |||| ||| Sbjct 16908809 GACCTTCTCAATGGTGTCCCTGGGCTCGACCTCAAGGGCGATGGTCTTACCAGTTACAGT 16908750 Query 101452 TTTTACAAATATCTGCATGGTT 101473 ||| ||||| |||||||| ||| Sbjct 16908749 TTTCACAAAGATCTGCATTGTT 16908728 >seq29 Length=30315017 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 101245 TCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGAT 101304 |||||| || || | || | || || || |||||| | | || ||||| || | | Sbjct 6174640 TCCTCTCAAGCGCAGGACCAGGTGCAGAGTCGATTCTCT--GGATGTTGTAGTCAGACAG 6174583 Query 101305 AGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAAT 101364 || | | |||| |||| ||||| || ||||| |||| | ||| || || || | || Sbjct 6174582 GGTGCGGCCATCTTCCAGCTGCTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGAGCGAT 6174523 Query 101365 GCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTC 101424 |||| | || ||||| || || || ||| | || | |||||| | || || || Sbjct 6174522 GCCTGCCTTGTCTTGGATCGTTGCCTTGACACTCTCAATGGTGTCACTGGGCTCGACCTC 6174463 Query 101425 AAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || ||||| || ||||| ||||||||||| ||| | |||||||| || Sbjct 6174462 CAGGGTGACGGTCTTGCCAGTTAAAGTTTTCACAGAGATCTGCATTGT 6174415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396237821339514