Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 2e-14 >seq5 Length=88520344 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || ||||| || | ||||| ||||||||||| |||||||| |||||||| || Sbjct 18711931 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCTTGGATC 18711990 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| ||||| |||| || |||| | | |||||| || ||||| || || || || Sbjct 18711991 TTGGCTTTTACATTTTCTATGCTATCCAAGGTCTCAACCTCAAGAGTGATGGTCTTCCCC 18712050 Query 193335 GTTAGCGTTTTTACAAATAT 193354 |||| || | |||||| || Sbjct 18712051 ATTAGGGTCTCTACAAAAAT 18712070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899559913796640