Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=88520344 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420 || ||||| || || | |||| |||| || || ||||||||||| | ||||| ||| Sbjct 18711901 TAGTCAGACAAGGTAGATCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGCCTCTGCTGA 18711960 Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480 ||||| || |||||||| |||||||| || || ||||||||| ||| ||| | Sbjct 18711961 TCAGGAGGAATTCCTTCCTTATCTTGGATCTTGGCTTTTACATTTTCTATGCTATCCAAG 18712020 Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCT 192532 | || || || ||||| ||||| || || ||| || | | ||| |||| Sbjct 18712021 GTCTCAACCTCAAGAGTGATGGTCTTCCCCATTAGGGTCTCTACAAAAATCT 18712072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984374020112700