Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq129 170 2e-36 seq65 170 2e-36 seq2 170 2e-36 seq206 102 1e-15 seq170 96.9 4e-14 seq12 87.8 2e-11 seq70 86.0 8e-11 >seq129 Length=2535082 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 149662 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 149721 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| || ||| | ||||||| |||| | Sbjct 149722 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 149781 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 149782 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 149841 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 149842 GGACCTGCTTGAGCACCTTGTA 149863 >seq65 Length=11280912 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 10702332 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 10702391 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 10702392 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 10702451 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 10702452 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10702511 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 10702512 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 10702548 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 10691068 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 10691009 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 10691008 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 10690949 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 10690948 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10690889 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 10690888 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 10690852 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| |||| || Sbjct 11250625 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACTGCCGTCTGGATCTCCCGCGACGTGA 11250684 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 11250685 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 11250744 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 11250745 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 11250804 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 11250805 GGACCTGCTTCAGCACCTTGTA 11250826 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 10680745 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 10680686 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 10680685 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 10680626 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 10680625 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10680566 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||| |||| |||||||| || Sbjct 10680565 GGACCCGCTTCAGCACCTTATA 10680544 Score = 134 bits (148), Expect = 2e-25 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 1254378 GCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCG 1254437 || ||||||||||| |||| | || || |||||||||| | ||||||| ||| Sbjct 11271383 GCCGTCTGGATCTCCCGCGAGGTGACGGTCGAGCGCTTGTTCTAACGCGCCAGGCGGGAC 11271442 Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||| ||||||| |||| ||||||||||| ||||||||||||| ||| | | Sbjct 11271443 GCCTCGCCTGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCATGATGCCCATGGCC 11271502 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAG 1254557 ||| ||||||||| ||||||||| |||||||| ||||||||||| | | || |||| Sbjct 11271503 TTGGACGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGTACACGTACACCGAG 11271562 Query 1254558 TA 1254559 || Sbjct 11271563 TA 11271564 Score = 107 bits (118), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||| |||||| ||||||||||| || | || Sbjct 10075432 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCACACGGCCGTCTGGATCTCCCGGGACGTGA 10075373 Query 1254403 TCGT--GTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || |||| ||||| | ||||||| ||| || || | | ||||| |||| Sbjct 10075372 TGGTTGGTTGG--TTGTTGTAACGCGCCAGGCGGGACGCTTCACCGGCCATGCGTTCGAA 10075315 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||| | ||||| || ||||||| |||| | |||| ||||| ||| || || Sbjct 10075314 AATATCGGTCACAAAGGAATTCATGATACACATGGCCTTGGAAGAGATTCCCGTCTCCGG 10075255 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGAT 1254547 ||| |||||||| |||||||||||||| Sbjct 10075254 GTGGACCTGCTTCAGCACCTTGTAGAT 10075228 Score = 107 bits (118), Expect = 2e-17 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||| | ||||||| |||| ||||||||||| ||||||||||||| ||| | | Sbjct 10664201 GCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCATGATGCCCATGGCC 10664142 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAG 1254557 ||| ||||||||| ||||||||| |||||||| ||||||||||| | | || |||| Sbjct 10664141 TTGGACGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGTACACGTACACCGAG 10664082 Query 1254558 TA 1254559 || Sbjct 10664081 TA 10664080 Score = 104 bits (114), Expect = 3e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 10754934 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 10754875 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 10754874 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 10754815 Query 1254463 TGTCGTTGACAAACG 1254477 |||||||||| |||| Sbjct 10754814 TGTCGTTGACGAACG 10754800 >seq2 Length=97923104 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | ||| |||| | || Sbjct 81050621 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCCCGCGAGGTGA 81050680 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 81050681 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGTTCGAAGA 81050740 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 81050741 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 81050800 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 81050801 GCACTTGCTTCAGCACCTTGTA 81050822 >seq206 Length=200234 Score = 102 bits (112), Expect = 1e-15 Identities = 130/178 (73%), Gaps = 7/178 (4%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||||| || | |||||||||| |||| ||| || |||||||| | ||||| Sbjct 513 CAGGCGCAAGGTGCTCTGGATCTCCCGCGATGTGATGGTTGAACGCTTGTTGTAATGCGC 454 Query 1254428 C-AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1254486 | | ||| |||||| | ||||||| | || ||||||||||| || |||||||||| Sbjct 453 CCACCCGGGACGCCTCGCAGGCGATGCGCTGGAAGATGTCGTTGACGAATGAGTTCATGA 394 Query 1254487 CCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | | ||||||| | ||||||||| |||||||| ||||||||||| Sbjct 393 TGCCCATGGGC------GAGATGCACGTGTCGGGGTGGACCTGCTTCAGCACCTTGTA 342 >seq170 Length=712956 Score = 96.9 bits (106), Expect = 4e-14 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 755940 GACAGCGCCACGTAGGCCTGGCCGCAGTCAAAGATGCCGCTCATCGAGATGACGGCCCGG 755999 || || ||||| ||||||||||||| | |||| | | || || ||||| | | | Sbjct 92672 GAGAGTGCCACATAGGCCTGGCCGCTGGCAAATACTCGGCCCAGAGAGATTTCCACACAA 92613 Query 756000 TCCAGCGACATGCCCTGGCACTTGTGGATGGTCATGGCCCAGGCCAGCAGCAGGGGCACC 756059 ||||| ||||| ||||||| ||||||||||| || |||||||||||| | ||||||| | Sbjct 92612 TCCAGGGACATCCCCTGGCTCTTGTGGATGGATATTGCCCAGGCCAGCTGGAGGGGCAGC 92553 Query 756060 TGC 756062 ||| Sbjct 92552 TGC 92550 >seq12 Length=64696486 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | ||||| ||| | |||| ||| || Sbjct 33294756 ACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATTAAGGGTTTGCTTGATGTT 33294815 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| | | ||||| ||||||||||| | |||| |||||||| ||||||||| Sbjct 33294816 ACATGCAAGACCATTGCCAATATGATCAAGGGGGAAACGCCTGAGGAGATTCGCAAGACC 33294875 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 33294876 TTCAATATCAA 33294886 >seq70 Length=10445819 Score = 86.0 bits (94), Expect = 8e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164 ||||||| ||||||||||| || || | || || || ||||||||||| || ||| Sbjct 1144304 AGCGGTTAAAGGGCAAGGAAGGCCGGGTGCGAGGGAACCTGATGGGCAAGCGTGTGGACT 1144363 Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224 | | || ||| | ||||||| |||||||||| | || ||| ||| |||| ||||||| Sbjct 1144364 TCTCGGCTCGCACGGTCATCACCCCCGACCCCAACCTCTCCATCGACCAGGTCGGCGTGC 1144423 Query 507225 CC 507226 || Sbjct 1144424 CC 1144425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106449692533434