Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 7e-13 seq21 86.0 8e-12 >seq4 Length=91125384 Score = 89.7 bits (98), Expect = 7e-13 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||||||| |||||||||||| | ||||| ||||| |||||||||| |||||| ||| Sbjct 20066173 GAGAAGAAGGAGATTTAGGCCCAGTGTATGGCTTTCAGTGGAGACATGTTGGGGCTGAAT 20066114 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACC 172620 ||| || | || || |||||||| |||| ||||| | |||| Sbjct 20066113 ATAAAGA-TATGAATTCAGATTACTCAGGTCAAGGTGCAGACC 20066072 Score = 82.4 bits (90), Expect = 1e-10 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||||||| |||||||||||| | ||||| ||||| ||| |||| ||| || ||| Sbjct 20113164 GAGAAGAAGGAGATTTAGGCCCAGTCTATGGCTTTCAGCAGAGCCATGTTGGGACTGAAT 20113105 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCA 172621 ||| || | || || |||||||| |||| |||||||| ||||| Sbjct 20113104 ATAAAGA-TATGAATTCAGATTACTCAGGTCAAGGAGTAGACCA 20113062 >seq21 Length=45764842 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||| ||| |||||||||||| | ||||| ||||| ||||||||| |||||| ||| Sbjct 37391909 GAGAAGGAGGAGATTTAGGCCCAGTCTATGGCTTTCAGTGGAGACATTTCGGGGCTGAAT 37391968 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCA 172621 ||| || | || || |||||||| |||| |||||||| |||| Sbjct 37391969 ATAAAGA-TATGAATTCAGATTACTCAGGCCAAGGAGTACACCA 37392011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632423172779760