Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 >seq13 Length=62994327 Score = 95.1 bits (104), Expect = 1e-14 Identities = 199/294 (68%), Gaps = 11/294 (4%) Strand=Plus/Minus Query 43689 TTGAAGTAGCAGAGGCGGCACACCGGCTGGTA---GCCCTCGTCCCCGATCTGCACGATC 43745 |||||||||||||| ||||| || | ||||| | | | | |||||| | | | Sbjct 51255729 TTGAAGTAGCAGAGACGGCATACTGAGTGGTACTTGTCTGCCCCGCCGATCACCTCCGCC 51255670 Query 43746 TCCGTGTTGTTGCCGAGCCGCCGCGTGAAGGAGGCCTTGTAGAGGCACTCGACGCAGACC 43805 ||| | | || |||| | ||| ||| |||| | || ||||| | ||| || Sbjct 51255669 TCCTTCTCTGCACCCAGCCTCTTGGTGTAGGCAGCCTCGCGGAAACACTCCATGCACACG 51255610 Query 43806 GACGACAGCTTCACGAAGCTCTCCGCCAGCGGGAGGAGCTGGTACACGGA----CCCGAA 43861 | | ||||||||| | |||||| ||||||| | | | ||| || ||| | |||| Sbjct 51255609 GCAGTCAGCTTCACCATGCTCTCGGCCAGCG---GCACCAGGTTCA-GGATGCTCTCGAA 51255554 Query 43862 CAGGGTCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGC 43921 || ||||||||| | || | ||| |||| || || ||||||| ||||| || Sbjct 51255553 GGCCTTCTTCTGGAAGGTTTCATCCAAGGCAACCACAATCACTGTCTTCCCAGCGTTGGC 51255494 Query 43922 CATGTCCTCGCAGAACTCCACTAGGTCGATGAAGAACTGGCCCTCGTCGATGCC 43975 |||| ||| || ||||||||| | |||| ||| ||||| || || || ||||| Sbjct 51255493 CATGGCCTTGCTGAACTCCACGATGTCGGGGAAAAACTGCCCTTCATCAATGCC 51255440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475991603730960