Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 8e-14 >seq1 Length=111700974 Score = 93.3 bits (102), Expect = 8e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 ||| |||||||||||| | |||||||||| | ||||| || || ||||| ||||| || Sbjct 81651286 GCACTATGGTGGTACTTTGTATCTAAAGGAGTTGAATATTTGGACACAGTATTTTTTATC 81651345 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || || || || || || || || |||||||| | ||| |||||| Sbjct 81651346 CTGAGGAAGAAAAACAACCAAGTCTCTTTCCTTCATGTGTATCATCACTGTACCATGTTT 81651405 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || || | ||| | || || || ||| | ||||| || || Sbjct 81651406 ACATTGTGGTGGATTGGGATCAAGTGGGTGGCAGGGGGACA 81651446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903316319238720