Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 1e-12 seq23 86.0 1e-11 seq50 84.2 5e-11 >seq11 Length=65385231 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/106 (79%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||||||||| | ||||| ||| |||| ||| | ||||| || | ||||||| ||| || Sbjct 25275717 TCGAAGTCTGAGCACAAGATGA-GAGTGGACGCCTTCTGAACGCTGTAGTCAGACAAGGT 25275659 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||| |||||||||||||| || || ||||| |||||||| ||| Sbjct 25275658 GCGTCCCTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGA 25275613 >seq23 Length=44997743 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||| | ||||| ||| |||| ||||| ||||| || ||||||| || || Sbjct 33016932 CGAAGTCTTAGCACAAGATGAGGAGTGGACTCCTTCTGAGTGTTGTAGTCAGACAGGGTA 33016873 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | | |||||||||||||||| || || ||||| |||||||| ||| Sbjct 33016872 CGTGCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCGTTGCTGA 33016828 >seq50 Length=16476254 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||||||| || || || | | ||||| ||||| ||| Sbjct 12451085 AAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGTGGTTGATCTTTGCCGGCAAG 12451026 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| ||||||||||| || ||| | || ||| | | ||||| |||||| ||||||| Sbjct 12451025 CAGCTGGAAGATGGACATACCTTGTCTGAGCACAGCATTCAGAAGGAGTCTGCTCTTCAT 12450966 Query 206374 CTTGTTTTGAGACTTC 206389 ||||| ||| |||||| Sbjct 12450965 CTTGTGTTGGGACTTC 12450950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181693576252242