Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5 116 3e-21 seq8 113 4e-20 seq29 109 5e-19 seq16 104 2e-17 seq9 96.9 3e-15 seq11 89.7 5e-13 seq10 86.0 6e-12 seq149 84.2 2e-11 seq116 84.2 2e-11 seq50 82.4 7e-11 seq23 82.4 7e-11 >seq5 Length=88520344 Score = 116 bits (128), Expect = 3e-21 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || | || ||| || || |||||||| || | Sbjct 40362607 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAG 40362666 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||||||| ||||| ||||| |||| ||||||||||||| ||| Sbjct 40362667 AGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 40362726 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||| ||| || || | | | | | |||||||| | ||||| Sbjct 40362727 ATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCGATGGTGTCGCT-GGCTCCAC 40362784 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || ||||||| || |||||||| || ||||| Sbjct 40362785 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCAT 40362832 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGA-ATGTTGTAATCGGC 35568 |||||| | | | || |||||| || | || ||| || || |||||||| || | Sbjct 1010631 CCACCATGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGA 1010690 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || | | || |||||||| ||||| ||||| |||| |||||||||||| || Sbjct 1010691 GAGAGTGCAGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGG 1010750 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 || || ||||||||| ||| ||| || || | | | | | |||||||| | |||| Sbjct 1010751 AATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCGATGGTGTCGCTGGGCTCCA 1010809 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| | ||||| || || || |||| || |||||||| |||||||||| Sbjct 1010810 CCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTC 1010860 >seq8 Length=79101790 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || | || ||| || || |||||||| || | Sbjct 4905330 CCACCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC---C 4905386 Query 35570 AAG---GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 ||| || || | || |||||||| ||||| ||||| |||| ||||||||||||| Sbjct 4905387 AAGAGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGG 4905446 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTC 35685 |||| || ||||||||| ||| ||| || || | | | | | |||||||| | || Sbjct 4905447 GGAATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTC 4905505 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || |||||| || |||||||| |||||||| Sbjct 4905506 AACCTCAAGGGTGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCAT 4905556 >seq29 Length=30315017 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 35552 TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAAC 35611 || |||||||| || | || ||| || | || ||||||||||| |||||||| |||| | Sbjct 6174602 TGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCCGCAAAGATCAGC 6174543 Query 35612 CGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC 35671 | ||||||||| | || | || ||||||| |||| || ||| | | | | | Sbjct 6174542 CTCTGCTGGTCAGGAGCGATGCCTGCCTTGTCTTGGATCGTTGCCTTGACACTCTCAATG 6174483 Query 35672 GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATC 35731 ||||| || | || ||||||| |||| || || || || |||||||||||| | ||| Sbjct 6174482 GTGTCACTGGGCTCGACCTCCAGGGTGACGGTCTTGCCAGTTAAAGTTTTCACAGAGATC 6174423 Query 35732 TGCATTCTGTGCGCA 35746 |||||| | ||||| Sbjct 6174422 TGCATTGTCAGCGCA 6174408 >seq16 Length=57704787 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| | | | ||| || | || |||||||| || || ||||| Sbjct 36557394 TCTTTCTGGATGTTGTAGTTAGACTGGGTGCGGCCATCTTCCAGCTGTTTCCCAGCAAAG 36557453 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || |||||||| ||||||| | | | | | Sbjct 36557454 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCCTGATATTC 36557513 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| | || | |||||||| | ||||| || ||||| || | |||||||||| Sbjct 36557514 TCAATGGTGGCCCTGGGCTCCACCTCAAGGGTGATGGTCTTACCAGTTACAGTTTTCACA 36557573 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 36557574 AAGATCTGCATT 36557585 >seq9 Length=72894145 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 35552 TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAAC 35611 || ||||||||||| | | || || | || ||||||||||| |||||||| || | | Sbjct 50766060 TGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATGAGC 50766001 Query 35612 CGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC 35671 | ||||||||| | || | || |||||| ||| |||||| ||||| | | | | Sbjct 50766000 CTCTGCTGGTCAG-GGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATG 50765942 Query 35672 GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATC 35731 || ||||| | |||||||||| ||||| | ||| || |||| || || || || || Sbjct 50765941 GTATCGCTGGGCTCCACCTCCAGGGTGATGGCTTTCCCAGTCAGGGTCTTTACGAAGATT 50765882 Query 35732 TGCATTCTGT 35741 |||| ||||| Sbjct 50765881 TGCA-TCTGT 50765873 >seq11 Length=65385231 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| |||| | |||| || | |||||| || | || ||||||||||| || ||||| | Sbjct 25275686 CCTTCTGAACGCTGTAGTCAGACAAGGTGCGTCCCTCTTCCAGCTGCTTGCCAGCAAAGA 25275627 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||| ||||| || | ||| | | |||||||||| |||||| ||||| | Sbjct 25275626 TCAGCCGTTGCTGATCAGGAGGCATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCT 25275567 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||| || | || ||||| | | ||| | | ||||| | || ||||||| Sbjct 25275566 CTATCGTATCTGAGGGGTCGACCTCGAGAGGGATGGGCCTCCCCGTGAGGGTCTTCACAA 25275507 Query 35727 ATATCTGCATTCTG 35740 | |||||||| ||| Sbjct 25275506 AGATCTGCATCCTG 25275493 >seq10 Length=65549256 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/231 (68%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || | ||| | ||| | || ||||| || ||||||| |||| | Sbjct 13233480 CCACCACGAAGTCTTAGCACAAGATGAAGAGTGGACTCCT---GAGTGTTGTAGTCGGAC 13233536 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | | || ||||||||||| || ||||| |||| ||| ||||| || | |||| Sbjct 13233537 AGGGTATGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGATCAGGAGGA 13233596 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | ||| || | || ||| Sbjct 13233597 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTCTATCGTATCAGAGGGCTCGACC 13233656 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | | ||| || || ||||| | || |||| | |||||||| ||| Sbjct 13233657 TCGAGAGGGATGGTCTTCCCCGTAAGGGTCTTCATGGAGATCTGCATCCTG 13233707 >seq149 Length=1867543 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/160 (73%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 ||||| |||||||| ||||| |||| |||||||||||| | |||| || |||||| || Sbjct 1663238 TCCAGTTGCTTACCAGCAAAAATCAGACGCTGCTGGTCC-AGGGAATGCCCTCCTTCTCT 1663296 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 ||| ||| |||| || | |||||||| | |||||||| | | ||| || Sbjct 1663297 TGGAT-TTTGGCTTTGACATTCTCGATGTGTCGCTGGGCTCCACCTCAAAGGCGATGGTC 1663355 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744 || |||| || || |||||| | ||||||| ||| |||| Sbjct 1663356 TTGCCCGCCAGGGTCTTCACAGAGATCTGCA-TCTTTGCG 1663394 >seq116 Length=3800712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||||| | || ||| | || ||||||||||| |||||||| Sbjct 1368252 CTCTTTCTGGGTGTTGTAATCATAGAGAGTGCGC-CATCTTCCAGCTGCTTGCCCGCAAA 1368310 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 1368311 GATGAGCCTCTGCTGGTCAGGTGG-ATGCCCTCCTTATCCTGGATCTTGCCCTTCACGCT 1368369 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | |||| ||||| ||||| ||||| || |||| || || || Sbjct 1368370 CTCGATGGCATCGCTGGGCTCCAGCTCCAGGGTGATGGTTTTCCCAGTCAGGGTCTTTAC 1368429 Query 35725 AAATATCTGCATTCTGT 35741 || || |||| ||||| Sbjct 1368430 GAAGATTTGCA-TCTGT 1368445 >seq50 Length=16476254 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | | |||||| | ||| | | | |||||| |||||| ||| || | | Sbjct 12450943 CCACCATGAAGTCCCAACACAAGATGAAGAGCAGACTCCTTCTGAATGCTGTGCTCAGAC 12451002 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| | | || ||||||||||| || ||||| ||||||| |||||| || | |||| Sbjct 12451003 AAGGTATGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCACTGCTGATCAGGAGGA 12451062 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | | ||||| ||| |||||| Sbjct 12451063 ATTCCTTCCTTATCCTGGATCTT 12451085 >seq23 Length=44997743 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/196 (69%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||| ||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 33016903 CTCCTTCTGAGTGTTGTAGTCAGACAGGGTACGTGCATCTTCCAGCTGCTTGCCAGCAAA 33016844 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||| ||||| | | ||||| | ||||||||| |||||| ||||| | | Sbjct 33016843 GATGAGCCGTTGCTGATAGGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 33016784 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | ||| || | || ||||||| |||| || || ||||| | || ||| Sbjct 33016783 CTCTGTCGTATCCGAGGGCTCGACCTCCAGAATGATGGTCTTCCCCGTAAGGGTCTTC-- 33016726 Query 35725 AAATATCTGCATTCTG 35740 || |||||||| ||| Sbjct 33016725 -AAGATCTGCATCCTG 33016711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450746255402160