Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq8 100 3e-16 seq5 100 3e-16 >seq8 Length=79101790 Score = 100 bits (110), Expect = 3e-16 Identities = 157/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| || ||||| || || || |||||||||| |||| | ||| Sbjct 4905339 AGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT--CCAAGAGAGTGC 4905396 Query 134556 G--AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTT 134613 | || || |||||||| || |||||||||| ||||||||| || || || ||||| | Sbjct 4905397 GGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCT 4905456 Query 134614 CTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAG 134673 | || ||||| ||||| |||||| || | |||||| | || || || || | Sbjct 4905457 CCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGG 4905516 Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | ||||| || | || | || || || || || ||||| || Sbjct 4905517 TGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCATGTT 4905559 >seq5 Length=88520344 Score = 100 bits (110), Expect = 3e-16 Identities = 159/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| || |||| || || || ||||||||||| | ||| | Sbjct 40362616 AGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGG 40362675 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || |||||||| || |||||||||| ||||||||| || || || ||||| || Sbjct 40362676 CCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCC 40362735 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| ||||| |||||| || | ||||| | | ||||| || || || Sbjct 40362736 TTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTC-GCTGGCTCCACCTCAAGGGTG 40362794 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTT 134722 ||||| || || || | || || || || || ||||| || |||| Sbjct 40362795 ATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCATGTTCCTTTT 40362841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505345320533040