Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq35 91.5 2e-13 seq1 82.4 1e-10 >seq35 Length=22427959 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || || ||||||| |||||||| || | |||| || || || || || Sbjct 214625 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCTTTTGATGGTGCC 214684 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| ||||| |||||| ||| || | ||| |||||||||||||| || ||||| Sbjct 214685 CAGGTTCTGCTGGTTGCTCTTCCGGTTACAAGAATCTTTGTAGAGCATGTACGGGGTCCC 214744 Query 111385 CGTCTCCGTCTGTGA 111399 ||||| ||||| || Sbjct 214745 TGTCTCTGTCTGAGA 214759 >seq1 Length=111700974 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429 ||| || || || | ||||||||||||||| |||||||| || ||| |||||| ||||| Sbjct 4141351 ATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAAATGTTCTCCAT 4141292 Query 122430 AAAGTCAAATGGATT 122444 |||||||||||| || Sbjct 4141291 AAAGTCAAATGGGTT 4141277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627966040939200