Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq21 111 1e-19 seq14 89.7 4e-13 seq10 86.0 5e-12 >seq21 Length=45764842 Score = 111 bits (122), Expect = 1e-19 Identities = 469/730 (64%), Gaps = 37/730 (5%) Strand=Plus/Minus Query 111574 TCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCATCAGCAACAAA 111632 ||||| || |||| || ||||| | || | || |||| | ||||| ||||| || Sbjct 37392458 TCCATTTTAATAGTTGGGTGAGGGTTGTA-TCCTTCAATCTGGAAGTCTTCAGCTTTGAA 37392400 Query 111633 ATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCG 111692 || |||||| ||||| | || ||| || || || |||||| | | || | ||| Sbjct 37392399 GTCATCAATGGTCTCAACTTTCCGCAGAATATTGAGCTTGGGAAAGTGTCTTGGTTCTCG 37392340 Query 111693 GGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACA 111752 ||||| | || | || | | ||||| | |||| |||||||||| | | Sbjct 37392339 CTGGAGCTGAACTTTCAGGGGTTCAACATGATTCAGGTAAATATGCGCATCTTCCAATGT 37392280 Query 111753 ATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCA-TGTATGTGAGTAGAC 111811 ||| | || || | |||| || || ||||||||||| |||| |||| ||||| | Sbjct 37392279 ATGTACAAAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATTGTAGGTGAGCAAGG 37392220 Query 111812 TGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCT 111871 |||| || || ||||| || ||||| || |||||||| || || || || || || |||| Sbjct 37392219 TGTAGCTGGCGATGTTGAAAGGCACCCCCAGGCCCATGTCACCTGACCTCTGGTACAGCT 37392160 Query 111872 GACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATG 111931 | || || || | | | |||||| || || || || | || |||||||||| Sbjct 37392159 GTCAGGACAGCTCACCATTCACCACATAGAACTGGCAGAGGGCGTGGCAAGGAGGCAGCA 37392100 Query 111932 CCATCCCATTCATAAAGGGTCCC--------CATGCACACATGATCATCCTTCTGCTGTA 111983 ||||| | | || |||| | || ||||||||||| ||| || | Sbjct 37392099 CCATC----TGAGGAA-GGTCTCTTGGATTGCAAGCACACATGATGATCTGTCATC---G 37392048 Query 111984 GCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATA 112043 | | | | || | ||| || | || || ||||||| || |||| || | || Sbjct 37392047 GGGTTGGTTTTGATTGT-GTCAGTAACCTTTTGTAGCTGGTGTACTCCTTGGCCTGAGTA 37391989 Query 112044 ATCCG-CCTGACATCCAGTGTATGTT--GCCCCATAGTGTCTCCATTGGAATCCATAAAT 112100 ||| | | | ||| | ||| || ||||| | |||||||| || || ||||| | Sbjct 37391988 ATCTGAATTCATATC---TTTATATTCAGCCCCGAAATGTCTCCACTGAAAGCCATAGAC 37391932 Query 112101 AGGCCCCAGATCTCCCGGGGCT-GTATCTGGAAATTGCTCTCTATTCAACAAATCACTTC 112159 || || | |||||| || | || ||| | | ||| || || | Sbjct 37391931 TGGGCCTAAATCTCCTCCTTCTCGGGTCGAGAA----CCC------CAAGAAGTCTCGGG 37391882 Query 112160 TAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATC 112219 || | | ||| ||||||||||| || || || | ||| | ||||| ||||||| Sbjct 37391881 ACCCATTGGCACCCCAGATCTTCACTCCCTTGGAGGAGAGTTCTTTAGCATTGGTGGATC 37391822 Query 112220 CTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTA 112279 | | |||||||| ||||| || |||| ||| || |||||| |||| | || || || | Sbjct 37391821 CCTTGATAAACCACAGCAACTCCTCCAGAACACCCTTCCAGAACACACGCTTGGTTGTCA 37391762 Query 112280 GCAGTGGAAA 112289 |||| || || Sbjct 37391761 GCAGAGGGAA 37391752 >seq14 Length=62556584 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| |||||||| ||||| | ||| || || ||||| || ||||| Sbjct 10148266 CCTGTGATGTGTGCGATCATGTAGGTGAGCAAGGCGTAGCTGGCGATGTTGAAAGGCACC 10148325 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || |||||||| || || || || || || ||||| || || || | | | |||| Sbjct 10148326 CCCAGGCCCATGTCACCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACA 10148385 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || || || | || |||||||||| |||||| Sbjct 10148386 TAGAACTGGCAGAGGGCGTGGCAAGGAGGCAGCGCCATC 10148424 >seq10 Length=65549256 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 112170 ATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAA 112229 || ||| ||||||||||| || || || | ||| | ||||| |||||||| | ||||| Sbjct 45448363 ATCCCAGATCTTCACTCCCTTGGAGGAGAGTTCTTTAGCATTGGTGGATCCCTTGATAAA 45448304 Query 112230 CCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289 ||| ||||| || |||| ||| || |||||| |||| | || || || ||||| || || Sbjct 45448303 CCACAGCAACTCCTCCAGAACACCCTTCCAGAACACACGCTTGGTTGTCAGCAGAGGGAA 45448244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391905465015526