Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq79 320 2e-82 seq38 91.5 2e-13 >seq79 Length=8777348 Score = 320 bits (354), Expect = 2e-82 Identities = 602/878 (69%), Gaps = 13/878 (1%) Strand=Plus/Plus Query 13673 CCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGAT 13732 |||||||| |||||||| || ||||| || ||||| || |||||| | ||||||||||| Sbjct 7085339 CCTGAGCCAGGAAGAGGCCGCCTTTCCAATTGCCTATTCCATCGTGGTTCACCACAAGAT 7085398 Query 13733 CGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCA 13792 |||||||||||| | || ||||||||||||||| | |||||||| |||||||||| || Sbjct 7085399 CGAGATGTTCGACAGGCTGCTGAGGGCCATCTACACGCCGCAGAATGTCTACTGCGTTCA 7085458 Query 13793 CGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGG--GC-GTCTCGGCCATCGCCAGGTG 13849 ||||||| || || ||| |||| | || || || || |||| |||||| ||| Sbjct 7085459 CGTGGACCGAAAATC---CGAGGAGTCCTTCTTGGCTGCTGTGTCGGGCATCGCATCGTG 7085515 Query 13850 CTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCG 13909 ||| |||||| | ||||| | |||| | |||||||||| | |||||||| || Sbjct 7085516 TTTCGGTAACGTCTTCGTGGCCAGCAAGCTGGAGAACGTGGTGTATGCTTCCTGGAGCCG 7085575 Query 13910 CGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTA 13969 |||||||||||||||| ||||||| ||||||| | | | | |||| ||| Sbjct 7085576 GGTGCAGGCCGACCTCAACTGCATGAAGGACCTGTATGGGATGGGTGCAGACTGGAAGTA 7085635 Query 13970 CCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGC 14029 | || | ||||||||||| ||||| ||||| | || |||||||||||||| || | | Sbjct 7085636 CTTGATAAACCTGTGCGGCATGGATTTCCCTATTAAAACCAACCTGGAGATTGTCCAGAA 7085695 Query 14030 GCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCT 14089 ||| | | || | | || ||||| |||||||| ||| |||||| | | || Sbjct 7085696 GCTCAGGTCCTTACGGGGGCAGAACAGCCTGGAGACGGAGCCCATGCCGGCCAATAAAGA 7085755 Query 14090 GCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAG 14149 | | | |||||| ||| | | | | || | | || ||||| Sbjct 7085756 GGA---AAGGTGGAAGAAGCATTACGAAGTCGTGGATGGGACGCTCACAAAGACCGGGCT 7085812 Query 14150 GAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGT 14209 |||| |||| ||| || |||| | ||||| ||| | || | ||| || |||| ||| Sbjct 7085813 CGACAAAGCCCGGCCTCCTCTCAAAACACCCATGTTTTCCGGCAGCGCGTATTTTGTGGT 7085872 Query 14210 CACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTG 14269 | |||| | |||| | ||| || | | || | | | ||| | || Sbjct 7085873 GCGCAGGGACTATGTGGGTTACGTGCTAGAAAATGAAAACATCAGAAAGTTTATGGAGTG 7085932 Query 14270 GTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGG 14329 | | ||||| |||||||| || ||| | || ||||||||||| ||||| || | | Sbjct 7085933 GGCGCAAGACACCTACAGCCCTGATGAGTATCTCTGGGCCACCGTTCAGAGGATTT--CG 7085990 Query 14330 GACG-CCCGGGGGGA-TCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387 |||| |||||| | | | ||| || || || |||| || |||||| |||| Sbjct 7085991 GACGTCCCGGGCGCACTGCCCTCGAACCGTAAATATGACATGTCTGACATGCACGCCATC 7086050 Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447 | ||||||||||||||||||||||| |||||| || | | ||||| | |||||| Sbjct 7086051 GCCAGGTTCGTCAAGTGGCACTACTTCGAGGGCGACGTTGCCCAGGGGGCTCCCTACCCG 7086110 Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507 || ||| |||| ||||||| | | || | ||| ||||||| | || ||| |||| ||| Sbjct 7086111 CCCTGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTCTTCGGAGCTGGAGACTTGAACTGG 7086170 Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGA 14545 || | || | ||| |||| ||||||||||| || Sbjct 7086171 ATGTTGCGCCAGCACCACTTGTTTGCCAACAAGTTTGA 7086208 >seq38 Length=20508454 Score = 91.5 bits (100), Expect = 2e-13 Identities = 243/371 (65%), Gaps = 8/371 (2%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || |||||| |||||| | || || ||||| |||||||| || ||| |||| | ||| Sbjct 17860729 CCACTGAGCAAAGAAGAGTTAGACTTCCCCATTGCCTACTCCATGGTGGTCCATGAGAAG 17860788 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 || || | || || | || ||||| || | || ||||| |||||| | ||||||||| Sbjct 17860789 ATTGAAAATTTTGAAAGACTGCTGAGAGCTGTGTATGCCCCCCAGAACATATACTGCGTC 17860848 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850 |||||||| |||||| || |||| || | || ||| || | | ||| Sbjct 17860849 CACGTGGATGAAAAGTCCCCAGAACCATTCAAAACGGCCATCAAGGCGATTGTCGCATGC 17860908 Query 13851 TTCCCTAACGTGGCCCTGGCC----CACCGGCTGCACGACGTGGTGTACGGCTCCTGGAG 13906 ||||| || || | ||||| || || | || ||||| || | ||| ||| Sbjct 17860909 TTCCCAAATGTCTTCATGGCCAGTAAACTGGTTCCA----GTGGTTTATGCCTCGTGGTC 17860964 Query 13907 TCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAG 13966 | |||||||| ||| | | ||||||| ||| || | ||| || |||| Sbjct 17860965 CAGGGTGCAGGCAGACTTGAACTGCATGGAAGACTTGCTCCAGAGCCCGGTGCCATGGAA 17861024 Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||| | || ||| || |||| ||||| || | |||||||| ||||| || | Sbjct 17861025 ATACTTCCTGAACACATGTGGGACAGACTTTCCCATAAAGACCAATGCCGAGATGGTCCA 17861084 Query 14027 GGCGCTGAAGG 14037 ||| || |||| Sbjct 17861085 GGCTCTCAAGG 17861095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658670015915520