Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-12 >seq5 Length=88520344 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/238 (69%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 27781 AATAGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTC 27840 || || || ||||| || |||||||| || || || || || || || |||| || Sbjct 40362841 AAAAGGAACATGCACATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTG 40362782 Query 27841 GAAAGCACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTC 27898 || || |||| || | ||| |||||| ||||| ||||| || || ||| Sbjct 40362781 GAGC-CAGCGACACCATCGAGAAT--GTCAAAGCCAAAATCCAAGACAAGGAGGGCATTC 40362725 Query 27899 CGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGT 27958 | ||| ||||| || | |||||||| || ||||| |||| || | |||| | | Sbjct 40362724 CCCCGGACCAGCAGCGTCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCT 40362665 Query 27959 CCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || ||||||||||| |||||| ||| |||| ||||| ||||| ||||||| || Sbjct 40362664 CGGACTACAACATCCAGAAAGAGCCCACCCTGCACTTGGTGCTGCGTCTGCGTGGTGG 40362607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355825959912654