Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 >seq8 Length=79101790 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || ||||| |||| || || ||||| || || ||||| || Sbjct 4905559 AACATGCAGATCTTTGTGAAGACCCTGACGGCCAAGACCATCACCCTTGAGGTTGAGCCC 4905500 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | ||| | |||| | ||||| || || | || || || Sbjct 4905499 AGCGACACCATTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATTCCCCCGGA 4905441 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || |||||| | || ||||| || ||||| ||||| || | |||||| | || || Sbjct 4905440 CCAGCAGCGTCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCTTGGACTA 4905381 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || ||||||||||| Sbjct 4905380 CAACATCCAGAAAGAGTCCAC 4905360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337974988028216