Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq51 255 5e-63 seq25 239 4e-58 seq92 196 4e-45 seq30 118 9e-22 seq4 114 1e-20 seq1 95.1 1e-14 seq3 89.7 4e-13 >seq51 Length=16359109 Score = 255 bits (282), Expect = 5e-63 Identities = 589/880 (67%), Gaps = 18/880 (2%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || ||| ||||| ||| || ||||| || || || ||||| | || || || ||| Sbjct 9671633 TGATACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGACATGTTCTCC 9671692 Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAAT 4379 ||||| ||||| || || | | ||| | | || | | | || | | |||| | Sbjct 9671693 ATAAAGTCAAATGGGTTTTCTACTTTGAACAGCTTGTTAAAACCCAG---TTCCAGCATT 9671749 Query 4380 CG---GTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | ||| || || ||||| || | ||| |||| | ||| || |||||||| | | Sbjct 9671750 AGCCTGTCTGCCACGAATTCAATGTGCTGTGTCATCAAAGTGCAATTCATTCCAATCAGT 9671809 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 ||| || | || | || | || || ||||||| | || || | || || Sbjct 9671810 TTCAAGGGCAAGGCTTCCGTAAGGAATTCCTGTTCTACTCTGACAGCATTCACAATGATT 9671869 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556 |||| || | | | | || ||||| | | | || | |||| | || ||||| Sbjct 9671870 TCTTGTACTCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAACACGAGGCAGGCAAAG 9671929 Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616 ||||| |||||||| || ||||||| ||| | ||| || |||||||| | || |||||| Sbjct 9671930 TCACAGTGCAAACCCTCATCTCTGCGAATAACTTCATTGGAAAACGTGAGGCCTGGCATT 9671989 Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676 | |||| || || ||||| || || | |||||| || || || ||||| |||||||| Sbjct 9671990 AGTCCTCCTTTCTTGAGCCAGAAGATGGAGGCAAACGAACCGGAGAAGAAGATGCCTTCC 9672049 Query 4677 ACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTT 4736 || || ||||| ||||| | || || | | || ||||||| |||||| Sbjct 9672050 ACTGCTGCAAAGGCTACAACTCTCTCTCCATAGGTACTTTCTTTGTCGCCAATCCAACGC 9672109 Query 4737 AATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---AT 4793 || ||||| | || || ||||| || || || ||||| | | || | || | | Sbjct 9672110 AAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCCGTGGCACTGAAGAGATAC 9672169 Query 4794 TTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852 | |||| || ||| |||| ||| |||||||| || || || |||||||||||||| Sbjct 9672170 TCCCTTTCTT----TGGACTCTTTAATGTAAGTGTCAATCAGGAGACTATACATTTCAGA 9672225 Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAAC 4912 |||||| || || || ||||| || || || || || | | || ||||| | |||| Sbjct 9672226 ATGTATGTTATCCATTGCAATTTGGAAACCATAGAACTAGCGGGCCTCTGTAATCTGAAT 9672285 Query 4913 TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAA 4972 || | | ||||| || || | |||||| | || || ||||||||||||||||| || Sbjct 9672286 GTCTTGGCTAAATCGCTCCACCAGGTTTTCATGCACGATGCCGTCACTGGCTGCAAAGAA 9672345 Query 4973 CGCCAAAACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031 |||| | | || ||||| || | || | || ||||||| || || |||||| | | Sbjct 9672346 AGCCAGAGCGTGGGATATGAAAT-CTCTCTCCTCAGGCTGCAGGGCTTCCCAGTGCTGAA 9672404 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 ||||||| | ||| || | || | |||||||| || || || ||||| || |||| Sbjct 9672405 TGTCTTTAGAAAGATCCAC--CCTCGGCCGTCCAAAAGGAGGCCTCAGCTTTCTTATACA 9672462 Query 5092 TAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 | |||||| || | |||| || |||| | |||||| Sbjct 9672463 TCTGCCAAATGCCATGGTACTCGATGGGAAAGAAGACAAA 9672502 >seq25 Length=39250790 Score = 239 bits (264), Expect = 4e-58 Identities = 405/577 (70%), Gaps = 11/577 (2%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| |||| |||||||| || ||||||||||| ||||| || |||||||| | Sbjct 34005655 CAGGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGTTCCTTGGAAAACGTGAGG 34005596 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||||| |||| || || ||||| || || | ||||| || || || ||||| Sbjct 34005595 CCTGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCAAACGAACCGGAGAAGAAG 34005536 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTT 4726 |||||||| || || ||||| ||||| | ||| ||| | | |||| ||||||| Sbjct 34005535 ATGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAGGTAGCTT-CTTTGTCGCC 34005477 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 |||||| || ||||| | || || ||||| || || || ||||| | || | || Sbjct 34005476 AATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCAATGACATT 34005417 Query 4787 AAATAATTTACTTTTTTCAAATGGGTC-TTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 || | | ||| || ||| | || ||| ||||| || || || ||||||| Sbjct 34005416 GAAGAGAT-ACTCCCTTTCCTTGGAACCTTTAAT----GTGTCAATCAGGAGACTATACA 34005362 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 ||||||||||||| ||||| |||||||| || || || || || || | || ||||| | Sbjct 34005361 TTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAACGGGCCTCTGTAA 34005302 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 |||||||| | | ||||| || || | ||| || | ||||| | ||||||| || Sbjct 34005301 TCTGAACTTCTTGGCTAAATCGCTCCACCAGGTTCTCATGCACTAT-GCATCACTGGTTG 34005243 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAG 5024 |||| || |||| | | || ||||| || | || | || |||||||| || || |||| Sbjct 34005242 CAAAGAAAGCCAGAGCGTGGGATATGAAAT-CTCTCTCCTCAGGCTTCAGGGCTTCCCAG 34005184 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 || | |||||| | ||| | || || | |||||||| || || || ||||| Sbjct 34005183 TGCTGAGTGGCTTTAGAAAGATCCAGCTCCTCGGCCGTCCAAAAGGAGGCCTCAGCTTTC 34005124 Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121 || ||||| |||||| ||| | |||| || |||| Sbjct 34005123 TTATACATCTGCCAAATGTCATGGTACTCGATGGGAA 34005087 >seq92 Length=6660306 Score = 196 bits (216), Expect = 4e-45 Identities = 575/878 (65%), Gaps = 50/878 (6%) Strand=Plus/Plus Query 4262 GTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCAT 4321 ||| ||| ||||| ||| || ||||| || || || ||||| | ||||| || ||||| Sbjct 3253987 GTACTCGCCTACTCTCTTCTCAAAGAAGTTCGTCTTCCCTTCCAGGGAAATGTTCTCCAT 3254046 Query 4322 AAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACT---TTAGAGCTACAAGCA 4377 ||| ||||| || || | | ||| | || || || | || || || | ||| Sbjct 3254047 AAAGTCAAATGGGTTTTCTACTTTGAACATCTTGTTGAAACCCAATTCCAG-TGTTAGC- 3254104 Query 4378 ATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATC 4437 | ||| || || ||||| || |||| |||| | ||| || |||||||| | Sbjct 3254105 --CTGTCTGCCACGAATTCAATGTACTATGTCATTAAAGTGCAATTCATTCCAATCAGCT 3254162 Query 4438 TCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATAT 4497 |||| | || || | |||| || || |||||| | | || || | ||||| | Sbjct 3254163 TCACGTGCAGGGCCTCCGTCAGGAATTCCTGTTCTCTCCTGACAGCATTCATGATT---T 3254219 Query 4498 CTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAAT 4557 ||| || | | | | || || || | | | || | |||| | || ||||||| Sbjct 3254220 CTTGTACTCTCTGCTCCGAAGGGTTGTACAGCAGGTGTTTGAACACGAGGCAGGCAAAAT 3254279 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 |||| |||||||| || ||||||||||| ||||| || ||||| | | || ||||||| Sbjct 3254280 CACATTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGAGAGGCCAGGCATTA 3254339 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 |||| || || ||||| || || | |||||||| |||| |||| || ||||| | Sbjct 3254340 GTCCTCGTTTCTTGAGCCAGAAAATGGATGCAAATGAACCAG---AGAAGATTCCTTCCA 3254396 Query 4678 CGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTT 4736 | | ||||| ||||| | ||| || | | | || |||||| | |||||| Sbjct 3254397 CTGTCGCAAAGGCTACAACTCGCACTCCATAGGTAACT-TCTTTGTTTCCAATCCAACGC 3254455 Query 4737 AATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA-ATTT 4795 || ||||| | || || ||| || || || ||||| || | || || || | || | Sbjct 3254456 AAGGCCCAATCTGCCTTCACCTTCACACAAGGCATTGTTTAAGTGGCATTGAAGAGATAT 3254515 Query 4796 ACTTTTTTCAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 | ||| | ||| |||| |||||||||||| || || || ||||||||||||||| Sbjct 3254516 TCCCTTTCC--TTGGAATCTTTAATATAAGTGTCAATGAGGAGATTATACATTTCAGAAT 3254573 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | || ||||| |||| ||| || || || | || || ||| || Sbjct 3254574 GGATGTTTTCCATAGTAATTTGGAAGCCACAGAAACA-----------------GAAATT 3254616 Query 4915 CGT-TACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 | | ||||| || || | ||| || || ||||| | |||||||||||||| || Sbjct 3254617 TATAGGCTAAATCGCTCCACCAGGTTCTCATTCACTATGCTATCACTGGCTGCAAAGAA- 3254675 Query 4974 GCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAA 5033 | ||| || ||||| || || || |||||| || |||||| | | | Sbjct 3254676 ---AGAACGTGTGATATGAAATATCTCTCCTCAGGC--------TTCCCAGTGCTGAATA 3254724 Query 5034 TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATA 5093 || |||| | ||| || || || | |||||||| || || || ||||| || ||||| Sbjct 3254725 TCGTTAGACAGATCCACCTCCTCGGCCGTCCAAAAGGAAGCCTCAGCTTTCTTATACATC 3254784 Query 5094 GACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 |||||| ||| | |||| | |||| |||| ||| Sbjct 3254785 TGCCAAATGTCATGGTACTCGGTAGGAAAGATGATAAA 3254822 >seq30 Length=30269221 Score = 118 bits (130), Expect = 9e-22 Identities = 160/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || || || || ||||| || || | ||||| ||||| || ||| || |||| Sbjct 16189102 AGCCCTGGTGAAGACAGACATTCAGATCGCTGTGCCTTCTGGGTGTTAGGGAAGAGTAGC 16189161 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| | ||||| ||||| | |||||||| || || || || || ||||| | ||| Sbjct 16189162 TCCACGCTCTGGCTTGGCTGCAAAACACTTCATAGATGTAGGAGCTGGTGTCA--GATGA 16189219 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAG 31941 ||| ||||||||||| ||||| |||| ||||||||||||| ||||| || | || Sbjct 16189220 AGATTATAGAGGAAATGTTGGTGTTGTTCTGTTTAATTTTGGCAAAGAAATAT-TTGAAG 16189278 Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGA 31980 | |||||||||||| | | || || || ||||| || Sbjct 16189279 --TCAAAAAGGGCGATCGAATTGCACAGCTCATTTGTGA 16189315 >seq4 Length=91125384 Score = 114 bits (126), Expect = 1e-20 Identities = 130/173 (75%), Gaps = 5/173 (3%) Strand=Plus/Minus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || | ||||| |||| || || | ||||| |||||||| ||| || |||| Sbjct 49023987 AGCCCTGGTGAGGACCGACGTTCAGATCGCTCTGCCTTCTGGGTGCTATGGAAGAGTAGC 49023928 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| | ||||| ||||| | |||||||| || || ||||| || ||| |||||| Sbjct 49023927 TCCACGTTCTGGCTTGGCTGCAAAACACTTCATAGATGTGGGAGCTGGTC--ATAGATGA 49023870 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAAT 31934 ||| ||||||||||| ||||| | || ||||||||||||| |||||||| Sbjct 49023869 AGATTATAGAGGAAATGTTGGTAGTGGTCTGTTTAATTTTGGCAAAGAAAAAT 49023817 >seq1 Length=111700974 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct 4137877 TCTTTAATGTAAGTGTCAATCAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCA 4137818 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 || || || || || || || | || ||||| | |||||||| | | ||||| Sbjct 4137817 ATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAATCTGAACTTCTTGGCTAAATC 4137763 >seq3 Length=92262745 Score = 89.7 bits (98), Expect = 4e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 ||||| ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| |||||| Sbjct 36798891 TGGTACTCGGAAACTCGTTTTTCAAAAAAATTTGTTTTCCCTTCCAAAGAAATGTTTTCC 36798832 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 36798831 ATAAAATCAAAGGGATT 36798815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427005870387866