Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq25 149 7e-31 seq92 141 1e-28 >seq25 Length=39250790 Score = 149 bits (164), Expect = 7e-31 Identities = 311/460 (68%), Gaps = 5/460 (1%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| |||| || | || ||||| || ||||| | ||| || ||||| || | Sbjct 34005655 CAGGCAAAGTCACCGTGCAAACCCTCATCTCTGCTAATAAGTTCCTTGGAAAACGTGAGG 34005596 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||||| ||||||||| || | ||| || || | ||||| || ||||| ||||| Sbjct 34005595 CCTGGCATTAGTCCTCGTTTCTTGAGCCAGAAGATGGATGCAAACGAACCGGAGAAGAAG 34005536 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || |||||||| |||| || || | || || | | || | Sbjct 34005535 ATGCCTTCCACTGCTGCAAAGGCTACAACTCGCTCTCCGTAGGTAGCTTCTTTGTCGCCA 34005476 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||||| |||||| || ||||| ||||| ||||| | || Sbjct 34005475 ATCCAACGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCAATGACATTG 34005416 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||| | |||| | | || ||| |||| ||||| || | |||||||||| Sbjct 34005415 AAGAGATACTCCCTTTCCTTGGAACCT-TTA---ATGTGTCAATCAGGAGACTATACATT 34005360 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||||| || ||||| |||||||| || || ||||| ||||| | || || | | Sbjct 34005359 TCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATC 34005300 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| || | ||||| | | | || || | || || ||||||| | ||| Sbjct 34005299 TGAACTTCTTGGCTAAATCGCTCCACCAGGTTCTCATGCACTAT-GCATCACTGGTTGCA 34005241 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAG 23968 |||||||| ||| | | ||| |||| ||| || |||| Sbjct 34005240 AAGAAAGCCAGAGCGTGGGATATGAAATCTCTCTCCTCAG 34005201 >seq92 Length=6660306 Score = 141 bits (156), Expect = 1e-28 Identities = 238/344 (69%), Gaps = 3/344 (1%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||||||||| || | || ||||| || ||||| | |||||| ||||||| | Sbjct 3254270 CAGGCAAAATCACATTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGAGAGG 3254329 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||||| ||||||||| || | ||| || || | |||||||| || | |||| Sbjct 3254330 CCAGGCATTAGTCCTCGTTTCTTGAGCCAGAAAATGGATGCAAATGAACC---AGAGAAG 3254386 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || | ||||||||| |||| || ||| | || | | | | | Sbjct 3254387 ATTCCTTCCACTGTCGCAAAGGCTACAACTCGCACTCCATAGGTAACTTCTTTGTTTCCA 3254446 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||||| ||||||| || ||||| ||||||| | | || || Sbjct 3254447 ATCCAACGCAAGGCCCAATCTGCCTTCACCTTCACACAAGGCATTGTTTAAGTGGCATTG 3254506 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||| | |||| | |||| | ||||| || ||||| || | | |||||||| Sbjct 3254507 AAGAGATATTCCCTTTCCTTGGAATCTTTAATATAAGTGTCAATGAGGAGATTATACATT 3254566 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 |||||||| || ||||| |||| ||| || || ||| | ||||| Sbjct 3254567 TCAGAATGGATGTTTTCCATAGTAATTTGGAAGCCACAGAAACA 3254610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521433230722800