Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5 120 2e-22 seq8 109 4e-19 seq1 107 1e-18 seq11 102 6e-17 seq9 100 2e-16 seq10 98.7 7e-16 seq23 95.1 9e-15 seq116 91.5 1e-13 seq93 86.0 5e-12 seq4 86.0 5e-12 seq16 84.2 2e-11 seq24 82.4 5e-11 >seq5 Length=88520344 Score = 120 bits (132), Expect = 2e-22 Identities = 168/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||| ||| || ||| ||| || ||||||||||| || Sbjct 40362604 ATACCACCACGCAGACGCAGCACCAAGTGCAGGGTGGGCTCTTTCTGGATGTTGTAGTCC 40362663 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || |||||||| || || ||||| |||| ||||||||| || | Sbjct 40362664 GAGAGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGG 40362723 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | |||||||| || | || Sbjct 40362724 GGAATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCGATGGTGTC-GCTGGCTC 40362781 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 40362782 CACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATGTGCATG 40362833 Score = 100 bits (110), Expect = 2e-16 Identities = 157/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 44119 CAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTG-GATGTTGTAATCGGCGAGTTGGC 44177 ||| | || ||||| ||| || ||| ||| || || ||||||||| || | ||| || Sbjct 1010639 CAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGTGATGTTGTAGTCCGAGAGAGTGC 1010698 Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237 | || |||||||| || || ||||| |||| | ||||||| || | || | || | Sbjct 1010699 AGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGATGCTGCTGGTCCGGGGGAATGCCCT 1010758 Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACC 44296 |||| || || || |||| | ||| | ||||||||| || |||||||| | Sbjct 1010759 CCTTGTCTTGGATTTTA-GCTTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCAAGG 1010817 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || ||||||||||| ||||| ||||| Sbjct 1010818 GTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1010858 >seq8 Length=79101790 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||| ||| || ||| ||| || ||||||||||| || Sbjct 4905327 ATACCACCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCC 4905386 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 ||| ||| | || |||||||| || || ||||| |||| ||||||||| || | Sbjct 4905387 AAGAGAGTGCGGCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACGCTGCTGGTCCGGG 4905446 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | ||||||||| || || Sbjct 4905447 GGAATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTC 4905505 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| |||| ||||||||||| ||||| |||||| Sbjct 4905506 AACCTCAAGGGTGATGGTCTTGGCCGTCAGGGTCTTCACAAAGATCTGCATG 4905557 >seq1 Length=111700974 Score = 107 bits (118), Expect = 1e-18 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||| ||| || || ||| || |||||||||||||| Sbjct 26898450 ATACCACCACGCAGACGCAGCACCAAGTGCAGGGTCGACTC-TTCTGGATGTTGTAATCC 26898508 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | |||| ||| | || |||||||| ||||| ||||| |||| ||||||||| | || Sbjct 26898509 GAGAGT--GCGGCCATCCTCCAGCTGTTTCCCAGCAAAAATCAGACGCTGCTGGT-TGGG 26898565 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | ||||||||| || || Sbjct 26898566 GGAATGCCCTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCGATGGTGTCGCTGGGCTC 26898624 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| | || || ||||| || | ||||||||||| ||||| ||||| Sbjct 26898625 CCCCTCAAGGGTGATGGTCTTGCCTGCCAGGGTCTTCACAAAGATGTGCAT 26898675 >seq11 Length=65385231 Score = 102 bits (112), Expect = 6e-17 Identities = 164/229 (72%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || |||| ||||| | ||| || ||| | ||| | |||| || | | |||| || | | Sbjct 25275722 CCACCTCGAAGTCTGAGCACAAGATGA-GAGTGGACGCCTTCTGAACGCTGTAGTCAGAC 25275664 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || || || | || ||||||||||| || |||||||||| || |||||||| | ||| Sbjct 25275663 AAGGTG-CGTCCCTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGATCAGGAGG 25275605 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCA 44288 || || ||||| ||| ||||| ||||| || || ||| || || | || || | Sbjct 25275604 CATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATCCTC-TATCGTATCTGAGGGGTCGA 25275546 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | | || | | | ||||||||||||||||| ||||| ||||| Sbjct 25275545 CCTCGAGAGGGATGGGCCTCCCCGTGAGGGTCTTCACAAAGATCTGCAT 25275497 >seq9 Length=72894145 Score = 100 bits (110), Expect = 2e-16 Identities = 136/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 44153 TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAA 44212 |||||||||||||| | || ||| | || ||||||||||| || |||||||| | Sbjct 50766060 TGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATGAGC 50766001 Query 44213 CGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATG 44272 | |||||| || | || | || ||||| ||| ||||| ||||| | | ||| Sbjct 50766000 CTCTGCTGGTCAGGGGG-ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATG 50765942 Query 44273 GTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC-GTGAGGGTCTTCACGAAGAT 44331 || ||| || |||||||||| || || | ||||||| || |||||||| |||||||| Sbjct 50765941 GTATCGCTGGGCTCCACCTCCAGGGTGATGG-CTTTCCCAGTCAGGGTCTTTACGAAGAT 50765883 Query 44332 TTGCAT 44337 |||||| Sbjct 50765882 TTGCAT 50765877 >seq10 Length=65549256 Score = 98.7 bits (108), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | ||| || ||||| ||| ||||| | ||||||| |||| || | Sbjct 13233489 AGTCTTAGCACAAGATGAAGAGTGGACTCCT---GAGTGTTGTAGTCGGACAGGGTATGT 13233545 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||||| || |||||||| | ||| | || ||| Sbjct 13233546 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGATCAGGAGGAATTCCCTCC 13233605 Query 44240 TTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || ||| ||||| ||||| || | |||| || || | || || ||||| | | Sbjct 13233606 TTGTCCTGGATCTTGGCCTTCACATCCT-CTATCGTATCAGAGGGCTCGACCTCGAGAGG 13233664 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||| | |||| ||||| Sbjct 13233665 GATGGTCTTCCCCGTAAGGGTCTTCATGGAGATCTGCAT 13233703 >seq23 Length=44997743 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | ||| || ||| | ||| |||||| || ||||||| || | || || Sbjct 33016929 AGTCTTAGCACAAGATGAGGAGTGGACTCCTTCTGAGTGTTGTAGTCAGACAGGGTACGT 33016870 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||| | || ||||||| | ||| | |||||| Sbjct 33016869 GCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCGTTGCTGATAGGGAGGAATTCCTTCC 33016810 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| | || | || || | || || ||||||| | Sbjct 33016809 TTGTCCTGGATCTTGGCCTTCACATTCTCTGTCGTATCCGAGGGCTCGACCTCCAGAATG 33016750 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||||||| ||||| ||||| Sbjct 33016749 ATGGTCTTCCCCGTAAGGGTCTTC---AAGATCTGCAT 33016715 >seq116 Length=3800712 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || ||| |||||||||| ||| |||| | || ||||||||||| || ||||| Sbjct 1368252 CTCTTTCTGGGTGTTGTAATCATAGAGAGTGCGC-CATCTTCCAGCTGCTTGCCCGCAAA 1368310 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | | |||||| || | || | || ||||| ||| ||||| ||||| | Sbjct 1368311 GATGAGCCTCTGCTGGTCAGGTGG-ATGCCCTCCTTATCCTGGATCTTGCCCTTCACGCT 1368369 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||| ||| || |||| ||||| || || || || || || |||||||| || Sbjct 1368370 CTCGATGGCATCGCTGGGCTCCAGCTCCAGGGTGATGGTTTTCCCAGTCAGGGTCTTTAC 1368429 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 1368430 GAAGATTTGCAT 1368441 >seq93 Length=6471344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 44119 CAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCG 44178 ||| | || ||||| ||| || ||| || || ||||||||||| || | ||| ||| Sbjct 5958117 CAGACGCAGCACCAAGTGCAG-GTGGGATCTTTCTGGATGTTGTAGTCCGAGAGAGTGCG 5958059 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || ||||||| || || ||||| ||| ||||||||| |||| || | || || Sbjct 5958058 GCCATCCACCAGCTGTTTGCCAGCAAAAGTCAGACGCTGCTGGTCTGGGGGAATGCCCTC 5957999 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| || || || ||| | | | | |||||||| || || ||| | || Sbjct 5957998 CTTGTCTTGGATTTTAACCTTGACTTTCTCGATGGTGTCACGGGGCTCACTCTCAAGGGT 5957939 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | ||||| ||| | ||||||||||| ||||| ||||| Sbjct 5957938 AGTGGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 5957900 >seq4 Length=91125384 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 44119 CAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCG 44178 ||| | || ||||| ||| || ||| ||| || ||||||||||| || | |||| ||| Sbjct 27213448 CAGACGCAGCACCAAGTGCAG-GTGGACTCTTTCTGGATGTTGTAGTCCGAGAGT--GCG 27213504 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || |||||||| || || ||||| |||| || |||||| |||| | | | || || Sbjct 27213505 GCCATCCTCCAGCTGTTTACCAGCAAAAATCAGACACTGCTGGTCTGGAAGAATGCCCTC 27213564 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCG 44297 ||| || || || |||| | ||| | ||| ||| | || || |||| | | Sbjct 27213565 CTTGTCTCGGAT-TTTAGCTTTGACATTCTCGATGCTGTTGCTGGGCTCAGCCTCAAGGG 27213623 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | ||||| ||||| |||||||||| |||| ||||| Sbjct 27213624 TGACGGTCTTGCCCGTCTGGGTCTTCACAAAGACCTGCAT 27213663 >seq16 Length=57704787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || || || ||||||||||| | | | ||| | || ||| Sbjct 36557376 ACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTTAGACTGGGTGCGGCCATCTTCC 36557435 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||| |||||||||| | |||||| || | ||| | |||||||| || Sbjct 36557436 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 36557495 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | |||||| | || |||||||| | || || ||||| Sbjct 36557496 ATCTT-TGCCCTGATATTCTCAATGGTGGCCCTGGGCTCCACCTCAAGGGTGATGGTCTT 36557554 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || ||||| ||||| ||||| Sbjct 36557555 ACCAGTTACAGTTTTCACAAAGATCTGCAT 36557584 >seq24 Length=44670279 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | ||| || |||| ||| ||||| | |||||||| || | || ||| Sbjct 27083931 AGTCTTAGCACAAGAGGAAGAGTGGACTCCT---GAATGTTGTAGTCAGACAGGGTGCGT 27083987 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || ||||||| || || |||| ||| | || | || ||| Sbjct 27083988 CCATCTTCCAGCTGCTTGCCAGCAAAGACCAGCCGTTGCTCATCGGGAGAAATTCC-TCC 27084046 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| | |||| | || | || || ||||| | | Sbjct 27084047 TTGTCCTGAATCTTGGCCTTCACATTCTCTATCTTATCCGAGGGCTCGACCTCGAGAGGG 27084106 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||| | |||||||||||| |||| ||||| Sbjct 27084107 ATGGTCTTCCCCTTAAGGGTCTTCACGGAGATCTGCAT 27084144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359953537208034